RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ATRIPQ8WXE1 791 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 MYLPFQ96A32 169 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 SPATA32Q96LK8 384 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 MMS19Q96T76 1030 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 SMG9Q9H0W8 520 aaKnown RBP21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 KCTD10Q9H3F6 313 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 EXOC1Q9NV70 894 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 CCL26Q9Y258 94 aa21.96■■□□□ 1.11
PDLIM4-205ENST00000463615 TCF3P15923 654 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 PFKLP17858 780 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 GNL1P36915 607 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 NRLP54845 237 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 PSMC1P62191 440 aaKnown RBP21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 CCINQ13939 588 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 GAS6Q14393 721 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 WDR72Q3MJ13 1102 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 STKLD1Q8NE28 680 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 RUBCNQ92622 972 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 SYAP1Q96A49 352 aaPredicted RBP21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 PCED1BQ96HM7 432 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 MRPL45Q9BRJ2 306 aaKnown RBP21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 EPC1Q9H2F5 836 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 GKN1Q9NS71 199 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 NME7Q9Y5B8 376 aa21.95■■□□□ 1.1
PDLIM4-205ENST00000463615 PTPRDP23468 1912 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 TNNC1P63316 161 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 FAM160A1Q05DH4 1040 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 TNK2Q07912 1038 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 TRPC3Q13507 836 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 SCN4BQ8IWT1 228 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 FSIP1Q8NA03 581 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 C8orf48Q96LL4 319 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 TTLL2Q9BWV7 592 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 SNX25Q9H3E2 840 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 HPS4Q9NQG7 708 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 EHD2Q9NZN4 543 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 GCNT4Q9P109 453 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 ATP6V1DQ9Y5K8 247 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 GREB1Q4ZG55 1949 aa21.94■■□□□ 1.1
PDLIM4-205ENST00000463615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 A0A1W2PQ27 194 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 A0A1W2PQ64 194 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 A0A1W2PQD8 194 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 TRIM66O15016 1216 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 C4BPAP04003 597 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 PDGFRBP09619 1106 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 BDNFP23560 247 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 CXCL12P48061 93 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 MYL6P60660 151 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 NOP14P78316 857 aaKnown RBP21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 RUNX3Q13761 415 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 PDGFRLQ15198 375 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 TSSK4Q6SA08 328 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 DENND5BQ6ZUT9 1274 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 RIN3Q8TB24 985 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 SCAND2PQ9GZW5 306 aaPredicted RBP21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 TRAF3IP3Q9Y228 551 aa21.93■■□□□ 1.1
PDLIM4-205ENST00000463615 TRAV19A0A0A6YYK7 116 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 LRRIQ3A6PVS8 624 aaPredicted RBP21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 RHOBTB3O94955 611 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 USP17L7P0C7H9 530 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 PTPN1P18031 435 aaKnown RBP21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 SYKP43405 635 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 CASP4P49662 377 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 USP4Q13107 963 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 ZNF77Q15935 545 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 NFIL3Q16649 462 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 TDRD10Q5VZ19 366 aaKnown RBP21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 KIAA1958Q8N8K9 716 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 OR6B3Q8NGW1 331 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 TMC2Q8TDI7 906 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 GTF3C3Q9Y5Q9 886 aa21.92■■□□□ 1.1
PDLIM4-205ENST00000463615 WDR87Q6ZQQ6 2873 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 ANAPC1Q9H1A4 1944 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 TRDMT1O14717 391 aaKnown RBP21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 MAPK13O15264 365 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 RPN1P04843 607 aaKnown RBP21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 HOXA6P31267 233 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 GRIK1P39086 918 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 PPP3CCP48454 512 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 PDE6CP51160 858 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 NDUFA8P51970 172 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 CYP27A1Q02318 531 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 PON2Q15165 354 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 MDH1BQ5I0G3 518 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 CHFRQ96EP1 664 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 CHAMP1Q96JM3 812 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 SLC22A12Q96S37 553 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 ELOVL4Q9GZR5 314 aa21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 RBM12Q9NTZ6 932 aaKnown RBP21.91■■□□□ 1.1
PDLIM4-205ENST00000463615 OTOL1A6NHN0 477 aaPredicted RBP21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 IKBKBO14920 756 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 KIF20AO95235 890 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 NR3C1P04150 777 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 ANXA13P27216 316 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 AMPD2Q01433 879 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 SATB1Q01826 763 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 MTF1Q14872 753 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 ZACNQ401N2 412 aa21.9■■□□□ 1.1
PDLIM4-205ENST00000463615 TMEM196Q5HYL7 178 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms