RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 FAM3CQ92520 227 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 CCDC127Q96BQ5 260 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 RSPRY1Q96DX4 576 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
RTCB-202ENST00000463455 PRMT8Q9NR22 394 aaPredicted RBP12.72□□□□□ -0.37
RTCB-202ENST00000463455 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
RTCB-202ENST00000463455 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
RTCB-202ENST00000463455 TRAF3IP3Q9Y228 551 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
RTCB-202ENST00000463455 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 USP34Q70CQ2 3546 aa12.72□□□□□ -0.37
RTCB-202ENST00000463455 MYO15AQ9UKN7 3530 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 PTPRDP23468 1912 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 MYBPHLA2RUH7 354 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 IKBKBO14920 756 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 TRIM66O15016 1216 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
RTCB-202ENST00000463455 LRRN2O75325 713 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 PRAMEF12O95522 483 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
RTCB-202ENST00000463455 LMNAP02545 664 aaKnown RBP12.71□□□□□ -0.37
RTCB-202ENST00000463455 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.37
RTCB-202ENST00000463455 CD72P21854 359 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
RTCB-202ENST00000463455 PPP3CCP48454 512 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 NDUFA8P51970 172 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 CYP4F8P98187 520 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 LRRC32Q14392 662 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 KCNB1Q14721 858 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 ASCL5Q7RTU5 278 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 MAML2Q8IZL2 1156 aaPredicted RBP12.71□□□□□ -0.37
RTCB-202ENST00000463455 KIAA1958Q8N8K9 716 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 TAF4BQ92750 862 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 FAM84AQ96KN4 292 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 SLC46A2Q9BY10 475 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 SNX25Q9H3E2 840 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 CRTAC1Q9NQ79 661 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 TDP1Q9NUW8 608 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 FRMD4BQ9Y2L6 1034 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 OBSL1O75147 1896 aa12.71□□□□□ -0.37
RTCB-202ENST00000463455 SLC38A8A6NNN8 435 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 PHACTR2O75167 634 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 NR3C1P04150 777 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 P4HA1P13674 534 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 TCF3P15923 654 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 LMO2P25791 158 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 CTHP32929 405 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 DPYDQ12882 1025 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 DDR2Q16832 855 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 DGKKQ5KSL6 1271 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 KRBA2Q6ZNG9 492 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 SYNPOQ8N3V7 929 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 GUF1Q8N442 669 aaKnown RBP12.7□□□□□ -0.38
RTCB-202ENST00000463455 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 NELL1Q92832 810 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 MYLPFQ96A32 169 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 C8orf48Q96LL4 319 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 ELOVL4Q9GZR5 314 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
RTCB-202ENST00000463455 COL4A3Q01955 1670 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 OTOGLQ3ZCN5 2332 aa12.7□□□□□ -0.38
RTCB-202ENST00000463455 DMDP11532 3685 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 GREB1Q4ZG55 1949 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 TADA3O75528 432 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZNF202O95125 648 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 PAPSS2O95340 614 aaPredicted RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 C4BPAP04003 597 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 NUDT7P0C024 238 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 CHRNB1P11230 501 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 CCNE1P24864 410 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ANXA13P27216 316 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 GPR15P49685 360 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 CCR3P51677 355 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 KPNA1P52294 538 aaPredicted RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 NRLP54845 237 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 MYL6P60660 151 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 NOP14P78316 857 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 NUCB2P80303 420 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 AMPD2Q01433 879 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 FAM160A1Q05DH4 1040 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 BIRC3Q13489 604 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 NCOA4Q13772 614 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 PDGFRLQ15198 375 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZNF699Q32M78 642 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZACNQ401N2 412 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 INTS8Q75QN2 995 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 SCN4BQ8IWT1 228 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms