RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PFKLP17858 780 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 PTPN1P18031 435 aaKnown RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 BDNFP23560 247 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 GRIK1P39086 918 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 PPP3CCP48454 512 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 GPR15P49685 360 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 NDUFA8P51970 172 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 MYL6P60660 151 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 TNNC1P63316 161 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 AMPD2Q01433 879 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 LRRC32Q14392 662 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 BECN1Q14457 450 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 SGSM1Q2NKQ1 1148 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 ITPRIPL2Q3MIP1 535 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 DGKKQ5KSL6 1271 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 SDHAF4Q5VUM1 108 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 TXNDC8Q6A555 127 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 SYNPOQ8N3V7 929 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 KIAA0895Q8NCT3 520 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 OR6B3Q8NGW1 331 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 TMC2Q8TDI7 906 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 ATRIPQ8WXE1 791 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 NELL1Q92832 810 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 USP13Q92995 863 aaPredicted RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 CCDC34Q96HJ3 373 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 C8orf48Q96LL4 319 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 FAM83CQ9BQN1 747 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 GZF1Q9H116 711 aaPredicted RBP7.78□□□□□ -1.16
PTPRF-210ENST00000463041 CRTAC1Q9NQ79 661 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 ZSCAN32Q9NX65 697 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 TRAF3IP3Q9Y228 551 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 FRMD4BQ9Y2L6 1034 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 PCDHGA2Q9Y5H1 932 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 R4GN57 208 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 MYOFQ9NZM1 2061 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 NCANO14594 1321 aa7.78□□□□□ -1.16
PTPRF-210ENST00000463041 SPAG17Q6Q759 2223 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 TRAV19A0A0A6YYK7 116 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 A8MXQ7 604 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 SPECC1L-ADORA2AF8WAN1 911 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 TRIM66O15016 1216 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 MAPK13O15264 365 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 HCRTO43612 131 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF202O95125 648 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 PRAMEF12O95522 483 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 NR3C1P04150 777 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 P4HA1P13674 534 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 HDCP19113 662 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 RPL13P26373 211 aaKnown RBP7.77□□□□□ -1.17
PTPRF-210ENST00000463041 ANXA13P27216 316 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 CTHP32929 405 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 CXCL12P48061 93 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 PDE6CP51160 858 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 CCR3P51677 355 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 NOP14P78316 857 aaKnown RBP7.77□□□□□ -1.17
PTPRF-210ENST00000463041 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 ENPEPQ07075 957 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 DPYDQ12882 1025 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 MTAPQ13126 283 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 BIRC3Q13489 604 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 RUNX3Q13761 415 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 NCOA4Q13772 614 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 KCNB1Q14721 858 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 NFIL3Q16649 462 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF667Q5HYK9 610 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 CC2D1AQ6P1N0 951 aaPredicted RBP7.77□□□□□ -1.17
PTPRF-210ENST00000463041 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 DENND5BQ6ZUT9 1274 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 SPEM1Q8N4L4 309 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 KIAA1958Q8N8K9 716 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 ZBTB44Q8NCP5 570 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 PLEKHO2Q8TD55 490 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 TAF4BQ92750 862 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 MYLPFQ96A32 169 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 EXOC4Q96A65 974 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 PCED1BQ96HM7 432 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 ZFYVE19Q96K21 471 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 CYP2S1Q96SQ9 504 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 MRPL45Q9BRJ2 306 aaKnown RBP7.77□□□□□ -1.17
PTPRF-210ENST00000463041 TTLL2Q9BWV7 592 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 XYLT2Q9H1B5 865 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 PRMT8Q9NR22 394 aaPredicted RBP7.77□□□□□ -1.17
PTPRF-210ENST00000463041 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 TRPM5Q9NZQ8 1165 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 NXF1Q9UBU9 619 aaKnown RBP7.77□□□□□ -1.17
PTPRF-210ENST00000463041 COL4A2P08572 1712 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 GPR179Q6PRD1 2367 aa7.77□□□□□ -1.17
PTPRF-210ENST00000463041 COL4A3Q01955 1670 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 LRRIQ3A6PVS8 624 aaPredicted RBP7.76□□□□□ -1.17
PTPRF-210ENST00000463041 LILRB5O75023 590 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 TCF3P15923 654 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 CASP4P49662 377 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 CDH8P55286 799 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 MCCD1P59942 119 aaPredicted RBP7.76□□□□□ -1.17
PTPRF-210ENST00000463041 PSMC1P62191 440 aaKnown RBP7.76□□□□□ -1.17
PTPRF-210ENST00000463041 NUCB2P80303 420 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 TNK2Q07912 1038 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 NR1H3Q13133 447 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms