RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TBCAO75347 108 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 ERLIN2O94905 339 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 CA3P07451 260 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 FGFR1P11362 822 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 KCNE1P15382 129 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 GARTP22102 1010 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 NMT1P30419 496 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 RABGGTBP53611 331 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 ENPEPQ07075 957 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 RAD51AP2Q09MP3 1159 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 STK4Q13043 487 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 PSMD2Q13200 908 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 PRPF4BQ13523 1007 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 MYBPC2Q14324 1141 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 ZRSR1Q15695 479 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 KYAT1Q16773 422 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 ZC2HC1CQ53FD0 456 aaPredicted RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 FAM26FQ5R3K3 315 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 TWF2Q6IBS0 349 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 CD300LGQ6UXG3 332 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 FAM178BQ8IXR5 827 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 CCDC65Q8IXS2 484 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 GPR65Q8IYL9 337 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 GRAMD1CQ8IYS0 662 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 LRRC43Q8N309 656 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 MYCT1Q8N699 235 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 MFSD2AQ8NA29 543 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 BHLHE22Q8NFJ8 381 aaPredicted RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 STAMQ92783 540 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 CPB2Q96IY4 423 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 GUCD1Q96NT3 240 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 GSDMAQ96QA5 445 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 TARS2Q9BW92 718 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 PANK2Q9BZ23 570 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 GZF1Q9H116 711 aaPredicted RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 NXF3Q9H4D5 531 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 SEMA3GQ9NS98 782 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 PANK4Q9NVE7 773 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 TBC1D13Q9NVG8 400 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 CGNQ9P2M7 1197 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 CPSF3Q9UKF6 684 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 TRAF3IP3Q9Y228 551 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 LZTS1Q9Y250 596 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 RWDD3Q9Y3V2 267 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 MRPL42Q9Y6G3 142 aaKnown RBP6.26□□□□□ -1.41
VPS36-202ENST00000462289 PTPRDP23468 1912 aa6.26□□□□□ -1.41
VPS36-202ENST00000462289 PRAMEF27A3QJZ7 478 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 ZNF503-AS2A6NEH8 195 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 ARL5CA6NH57 179 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 CCDC169A6NNP5 214 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 ANKRD63C9JTQ0 380 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 H3BNC9 293 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 K7ENM7 598 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 KIAA0391O15091 583 aaKnown RBP6.25□□□□□ -1.41
VPS36-202ENST00000462289 RECQL4O94761 1208 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 SSBP05455 408 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS36-202ENST00000462289 MYBP10242 640 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 CASP1P29466 404 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 BMPR1AP36894 532 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 AARSP49588 968 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS36-202ENST00000462289 GATMP50440 423 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 UBE3AQ05086 875 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 GRIK3Q13003 919 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 KCNC3Q14003 757 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 NOLC1Q14978 699 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS36-202ENST00000462289 POSTNQ15063 836 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 ZNF124Q15973 351 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 SLC10A6Q3KNW5 377 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 EPC2Q52LR7 807 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 HERC4Q5GLZ8 1057 aaPredicted RBP6.25□□□□□ -1.41
VPS36-202ENST00000462289 NOMO2Q5JPE7 1267 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 HDXQ7Z353 690 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 TMEM192Q8IY95 271 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 COLGALT2Q8IYK4 626 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 CEP57L1Q8IYX8 460 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 GUF1Q8N442 669 aaKnown RBP6.25□□□□□ -1.41
VPS36-202ENST00000462289 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 ZBTB45Q96K62 511 aaPredicted RBP6.25□□□□□ -1.41
VPS36-202ENST00000462289 SNX27Q96L92 541 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 SCLT1Q96NL6 688 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 TGS1Q96RS0 853 aaKnown RBP6.25□□□□□ -1.41
VPS36-202ENST00000462289 TMEM175Q9BSA9 504 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 MRPL9Q9BYD2 267 aaKnown RBP6.25□□□□□ -1.41
VPS36-202ENST00000462289 CXCL16Q9H2A7 254 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 IKZF4Q9H2S9 585 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 NKX2-4Q9H2Z4 354 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 RSAD1Q9HA92 442 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 MIOSQ9NXC5 875 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 FAM53CQ9NYF3 392 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS36-202ENST00000462289 MSRAQ9UJ68 235 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 HES2Q9Y543 173 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 PCDHB7Q9Y5E2 793 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 IRAK3Q9Y616 596 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 PLXNA3P51805 1871 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 DENND4AQ7Z401 1863 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 BDP1A6H8Y1 2624 aa6.25□□□□□ -1.41
VPS36-202ENST00000462289 DOCK8Q8NF50 2099 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms