RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ZNF700Q9H0M5 742 aa4.25□□□□□ -1.73
CCT4-203ENST00000461540 CFAP97Q9P2B7 532 aa4.25□□□□□ -1.73
CCT4-203ENST00000461540 DKK3Q9UBP4 350 aa4.25□□□□□ -1.73
CCT4-203ENST00000461540 TRHDEQ9UKU6 1024 aa4.25□□□□□ -1.73
CCT4-203ENST00000461540 PROCRQ9UNN8 238 aa4.25□□□□□ -1.73
CCT4-203ENST00000461540 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.25□□□□□ -1.73
CCT4-203ENST00000461540 SPEF1Q9Y4P9 236 aa4.25□□□□□ -1.73
CCT4-203ENST00000461540 CFAP20Q9Y6A4 193 aaKnown RBP4.25□□□□□ -1.73
CCT4-203ENST00000461540 CCDC189A1A4V9 331 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 TARM1B6A8C7 271 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 IFRD1O00458 451 aaPredicted RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 CHEK2O96017 543 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 CENPBP07199 599 aaPredicted RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 IFIT2P09913 472 aaKnown RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 NBPF7P0C2Y1 421 aaPredicted RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 CHRM3P20309 590 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 DRD4P21917 467 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 RBM20Q5T481 1227 aaKnown RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 FAM102BQ5T8I3 360 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 EFCAB2Q5VUJ9 269 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 NXNQ6DKJ4 435 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 C11orf96Q7Z7L8 435 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 RBMXL3Q8N7X1 1067 aaKnown RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 EVI5LQ96CN4 794 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 SH2D3AQ9BRG2 576 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 CCDC8Q9H0W5 538 aaPredicted RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 SERTAD4Q9NUC0 356 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 MRPS18AQ9NVS2 196 aaKnown RBP4.24□□□□□ -1.73
CCT4-203ENST00000461540 ETAA1Q9NY74 926 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 TERF2IPQ9NYB0 399 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 SERPINB13Q9UIV8 391 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 RAD54BQ9Y620 910 aa4.24□□□□□ -1.73
CCT4-203ENST00000461540 LRRC14BA6NHZ5 514 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 PRSS29PA6NIE9 313 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 NT5C1B-RDH14C9J2C7 533 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 PRSS44E7EML9 344 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 NPHP1O15259 732 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 SOAT2O75908 522 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 KIF20AO95235 890 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 CD6P30203 668 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 ALDH9A1P49189 494 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 DSC2Q02487 901 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 ZNF551Q7Z340 670 aaPredicted RBP4.23□□□□□ -1.73
CCT4-203ENST00000461540 MAGEB6Q8N7X4 407 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 C3orf20Q8ND61 904 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 PPM1EQ8WY54 764 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 FAM136AQ96C01 138 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 CAMKK2Q96RR4 588 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 ARPC5LQ9BPX5 153 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 SIK2Q9H0K1 926 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 GPR35Q9HC97 309 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 ARHGEF3Q9NR81 526 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 RLIMQ9NVW2 624 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 SH3BP4Q9P0V3 963 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 AGAP1Q9UPQ3 857 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 PCDHA3Q9Y5H8 950 aa4.23□□□□□ -1.73
CCT4-203ENST00000461540 PPM1DO15297 605 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 RFPL1O75677 317 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 JTBO76095 146 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 PDHA1P08559 390 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 CYP2D6P10635 497 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 RARBP10826 455 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 CCND1P24385 295 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 PIK3CGP48736 1102 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 ADKP55263 362 aaKnown RBP4.22□□□□□ -1.73
CCT4-203ENST00000461540 PICALMQ13492 652 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 VPS53Q5VIR6 699 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 CXorf57Q6NSI4 855 aaKnown RBP4.22□□□□□ -1.73
CCT4-203ENST00000461540 CEP85Q6P2H3 762 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 DGKHQ86XP1 1220 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 PAF1Q8N7H5 531 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 FANCBQ8NB91 859 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 ATRIPQ8WXE1 791 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 JPH3Q8WXH2 748 aaPredicted RBP4.22□□□□□ -1.73
CCT4-203ENST00000461540 TNPO1Q92973 898 aaKnown RBP4.22□□□□□ -1.73
CCT4-203ENST00000461540 RTFDC1Q9BY42 306 aaPredicted RBP4.22□□□□□ -1.73
CCT4-203ENST00000461540 PRDM11Q9NQV5 511 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 SERGEFQ9UGK8 458 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 PNMA2Q9UL42 364 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 POLHQ9Y253 713 aa4.22□□□□□ -1.73
CCT4-203ENST00000461540 SMIM22K7EJ46 135 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 FZD9O00144 591 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 GABRDO14764 452 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 NXPH3O95157 252 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 ARIH2O95376 493 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 JUPP14923 745 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 SCP2P22307 547 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 PRDX5P30044 214 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 GCLCP48506 637 aaPredicted RBP4.21□□□□□ -1.74
CCT4-203ENST00000461540 KRT85P78386 507 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 IRX6P78412 446 aaPredicted RBP4.21□□□□□ -1.74
CCT4-203ENST00000461540 KIF22Q14807 665 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 ODF1Q14990 250 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 GRAMD1BQ3KR37 738 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 CEP78Q5JTW2 689 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 C10orf62Q5T681 223 aaPredicted RBP4.21□□□□□ -1.74
CCT4-203ENST00000461540 SLC29A4Q7RTT9 530 aa4.21□□□□□ -1.74
CCT4-203ENST00000461540 USP37Q86T82 979 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms