RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
ERGIC3-211ENST00000461043 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
ERGIC3-211ENST00000461043 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
ERGIC3-211ENST00000461043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.35
ERGIC3-211ENST00000461043 APEX2Q9UBZ4 518 aa12.89□□□□□ -0.35
ERGIC3-211ENST00000461043 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
ERGIC3-211ENST00000461043 F8VP50 259 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 TRIM66O15016 1216 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 CAVIN2O95810 425 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 ATP1A3P13637 1013 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 CEBPBP17676 345 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 GAREM2Q75VX8 874 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 PDZD4Q76G19 769 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 ENOSF1Q7L5Y1 443 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 TMEM150AQ86TG1 271 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 NPAS3Q8IXF0 933 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 TDRD5Q8NAT2 981 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 SHKBP1Q8TBC3 707 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 GPR152Q8TDT2 470 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 GIPC2Q8TF65 315 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 FGF13Q92913 245 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 FAM49BQ9NUQ9 324 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 CDH7Q9ULB5 785 aa12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-211ENST00000461043 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 SLC38A8A6NNN8 435 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 LGALS16A8MUM7 142 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 RNF225M0QZC1 329 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 ZNF197O14709 1029 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 TNFRSF10BO14763 440 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 CSH1P0DML2 217 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 CSH2P0DML3 217 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 LAMP2P13473 410 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 COPB1P53618 953 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 ZNF394Q53GI3 561 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 PPP1R26Q5T8A7 1209 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 GJB7Q6PEY0 223 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 SCN4BQ8IWT1 228 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 STKLD1Q8NE28 680 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 CYFIP2Q96F07 1278 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 SMARCD1Q96GM5 515 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 FAM81BQ96LP2 452 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 SMOQ99835 787 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 VPS16Q9H269 839 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 UBE2TQ9NPD8 197 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 GDE1Q9NZC3 331 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 AJAP1Q9UKB5 411 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
ERGIC3-211ENST00000461043 ANHXE9PGG2 379 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 TADA3O75528 432 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 AP1G2O75843 785 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 BEST1O76090 585 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 FGF19O95750 216 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 F11P03951 625 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 PAEPP09466 180 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 MYL4P12829 197 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 TRIM21P19474 475 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 GRIK1P39086 918 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 USP46P62068 366 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 SHC3Q92529 594 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 HEXIM2Q96MH2 286 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 ZSWIM1Q9BR11 485 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 MED10Q9BTT4 135 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 NAA15Q9BXJ9 866 aaKnown RBP12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 KIAA1257Q9ULG3 409 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 SIK3Q9Y2K2 1263 aa12.86□□□□□ -0.35
ERGIC3-211ENST00000461043 A0A1W2PRU2 124 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 FAM92AA1XBS5 289 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 BECN2A8MW95 431 aa12.85□□□□□ -0.35
ERGIC3-211ENST00000461043 HHLA1C9JL84 531 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms