RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ARL8AQ96BM9 186 aa17.82■□□□□ 0.44
YIPF3-205ENST00000460547 OSMRQ99650 979 aa17.82■□□□□ 0.44
YIPF3-205ENST00000460547 CYTH4Q9UIA0 394 aa17.82■□□□□ 0.44
YIPF3-205ENST00000460547 KAT6AQ92794 2004 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
YIPF3-205ENST00000460547 PTK6Q13882 451 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 HIC1Q14526 733 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 CYP4A22Q5TCH4 519 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 EMC10Q5UCC4 262 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 DAB2IPQ5VWQ8 1189 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 ALKAL1Q6UXT8 129 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 TMEM130Q8N3G9 435 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 FBXO25Q8TCJ0 367 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 CDHR5Q9HBB8 845 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 DDX56Q9NY93 547 aaKnown RBP17.81■□□□□ 0.44
YIPF3-205ENST00000460547 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 WHRNQ9P202 907 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 MTRF1LQ9UGC7 380 aaKnown RBP17.81■□□□□ 0.44
YIPF3-205ENST00000460547 USTQ9Y2C2 406 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 CITO14578 2027 aa17.81■□□□□ 0.44
YIPF3-205ENST00000460547 HMGB1P1B2RPK0 211 aaPredicted RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 SHOX2O60902 331 aaPredicted RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 GAS8O95995 478 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 CSF2RAP15509 400 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 CCL23P55773 120 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 TMEM62Q0P6H9 643 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 SHHQ15465 462 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 LRIT3Q3SXY7 679 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 GDF6Q6KF10 455 aaPredicted RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 XYLT1Q86Y38 959 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 NME8Q8N427 588 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 C1orf54Q8WWF1 131 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 ART4Q93070 314 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 MCRS1Q96EZ8 462 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 CPXM1Q96SM3 734 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 EIF2AQ9BY44 585 aaKnown RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 GTF2IRD1Q9UHL9 959 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 GNAT1P11488 350 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 KRT3P12035 628 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 GPD2P43304 727 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 KCNJ1P48048 391 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 NDST1P52848 882 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 PLTPP55058 493 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 EIF3BP55884 814 aaKnown RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 PSMC1P62191 440 aaKnown RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 KRT17Q04695 432 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 PDCLQ13371 301 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 PPP1R7Q15435 360 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 DRICH1Q6PGQ1 229 aaPredicted RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 LCLAT1Q6UWP7 414 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 DNAJB3Q8WWF6 145 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 ATP6V1G3Q96LB4 118 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 ZMAT2Q96NC0 199 aaKnown RBP17.8■□□□□ 0.44
YIPF3-205ENST00000460547 SLITRK1Q96PX8 696 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 MIS12Q9H081 205 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 TMBIM4Q9HC24 238 aa17.8■□□□□ 0.44
YIPF3-205ENST00000460547 C17orf102A2RUQ5 167 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 GOLGA6L10A6NI86 522 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 F8VP50 259 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 M0QYV0 167 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 KRT1P04264 644 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 ERBB2P04626 1255 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 NUDT17P0C025 328 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 SSR1P43307 286 aaKnown RBP17.79■□□□□ 0.44
YIPF3-205ENST00000460547 CRYBB1P53674 252 aaPredicted RBP17.79■□□□□ 0.44
YIPF3-205ENST00000460547 SKOR1P84550 965 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 ZNF844Q08AG5 666 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 BFSP2Q13515 415 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 ACAP1Q15027 740 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 XKR4Q5GH76 650 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 C9orf50Q5SZB4 431 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 ATL2Q8NHH9 583 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 UBLCP1Q8WVY7 318 aaPredicted RBP17.79■□□□□ 0.44
YIPF3-205ENST00000460547 UBQLN1Q9UMX0 589 aaKnown RBP17.79■□□□□ 0.44
YIPF3-205ENST00000460547 GINS2Q9Y248 185 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 R3HDM2Q9Y2K5 976 aaKnown RBP17.79■□□□□ 0.44
YIPF3-205ENST00000460547 NEU2Q9Y3R4 380 aa17.79■□□□□ 0.44
YIPF3-205ENST00000460547 A6NNZ2 444 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 TREHO43280 583 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 RPS6KA5O75582 802 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 RECQL4O94761 1208 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 RFC1P35251 1148 aaPredicted RBP17.78■□□□□ 0.44
YIPF3-205ENST00000460547 ORC1Q13415 861 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 TUBB8Q3ZCM7 444 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 CEP85LQ5SZL2 805 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 ATG4AQ8WYN0 398 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 HEXIM2Q96MH2 286 aaKnown RBP17.78■□□□□ 0.44
YIPF3-205ENST00000460547 PABPC3Q9H361 631 aaKnown RBP17.78■□□□□ 0.44
YIPF3-205ENST00000460547 NXF3Q9H4D5 531 aaKnown RBP17.78■□□□□ 0.44
YIPF3-205ENST00000460547 EFR3BQ9Y2G0 817 aa17.78■□□□□ 0.44
YIPF3-205ENST00000460547 SCN10AQ9Y5Y9 1956 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 TJP3O95049 919 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 MYZAPP0CAP1 466 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 SETSIPP0DME0 302 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 KCNE1P15382 129 aa17.77■□□□□ 0.44
YIPF3-205ENST00000460547 TCF4P15884 667 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms