RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 AUTS2Q8WXX7 1259 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 KAT5Q92993 513 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 MYLPFQ96A32 169 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 SEPT5Q99719 369 aaPredicted RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 RTP3Q9BQQ7 232 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 LHX5Q9H2C1 402 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 FBXO44Q9H4M3 255 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 SFXN1Q9H9B4 322 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 ZMYM5Q9UJ78 669 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 FNDC1Q4ZHG4 1894 aaPredicted RBP11.67□□□□□ -0.54
SMNDC1-203ENST00000460483 PDE4DIPQ5VU43 2346 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 O00370 1275 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 SOX1O00570 391 aaPredicted RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 MFAP3LO75121 409 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 AP1G2O75843 785 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CSPG5O95196 566 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 RTN3O95197 1032 aaPredicted RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 C8AP07357 584 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 POU2F2P09086 479 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CSH1P0DML2 217 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CSH2P0DML3 217 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 NPR3P17342 541 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 DESP17661 470 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 HNRNPH3P31942 346 aaKnown RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 IRS1P35568 1242 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 PRKCIP41743 596 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 PPP3CCP48454 512 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CDK17Q00537 523 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 DUSP4Q13115 394 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 PABPC1LQ4VXU2 614 aaKnown RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 DPY19L2P1Q6NXN4 242 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 TMEM184AQ6ZMB5 413 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 RBM23Q86U06 439 aaKnown RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CCDC112Q8NEF3 446 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 BAP1Q92560 729 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 GOLGA1Q92805 767 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 SPATA17Q96L03 361 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 HSFY1Q96LI6 401 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CCDC42Q96M95 316 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 PGLYRP2Q96PD5 576 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 GCNAQ96QF7 691 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 PANX2Q96RD6 677 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 DNAJC7Q99615 494 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 DUSP16Q9BY84 665 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 DPEP3Q9H4B8 488 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 SYNCQ9H7C4 482 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 LRRC4Q9HBW1 653 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CRTAC1Q9NQ79 661 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 KRT82Q9NSB4 513 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 ABHD10Q9NUJ1 306 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 TMEM51Q9NW97 253 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 FBXW11Q9UKB1 542 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 TSPAN16Q9UKR8 245 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 FAM50BQ9Y247 325 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 HCFC2Q9Y5Z7 792 aa11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
SMNDC1-203ENST00000460483 CEP290O15078 2479 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SSU72P8A0A1W2PR75 194 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 RBAK-RBAKDNI3L0D1 243 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 M0QYV0 167 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 RFXAPO00287 272 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 XPO1O14980 1071 aaKnown RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 EPHB6O15197 1021 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ZMYND10O75800 440 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 HAPLN1P10915 354 aaPredicted RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 BDNFP23560 247 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ADORA2BP29275 332 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 CLCN1P35523 988 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 APBA1Q02410 837 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ITIH3Q06033 890 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TBX2Q13207 712 aaPredicted RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 GOLGA7BQ2TAP0 167 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TCEAL5Q5H9L2 206 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 PPP1R26Q5T8A7 1209 aaPredicted RBP11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 CYP4A22Q5TCH4 519 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SCARA3Q6AZY7 606 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 DENND5BQ6ZUT9 1274 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 FAM35AQ86V20 835 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SLC47A2Q86VL8 602 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 ZDHHC17Q8IUH5 632 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 TMTC1Q8IUR5 882 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 SCN4BQ8IWT1 228 aa11.65□□□□□ -0.54
SMNDC1-203ENST00000460483 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms