RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 SMOC2Q9H3U7 446 aa18.9■□□□□ 0.62
PLOD3-209ENST00000460475 TMEM30AQ9NV96 361 aa18.9■□□□□ 0.62
PLOD3-209ENST00000460475 ZMYM5Q9UJ78 669 aa18.9■□□□□ 0.62
PLOD3-209ENST00000460475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.9■□□□□ 0.62
PLOD3-209ENST00000460475 F5P12259 2224 aa18.9■□□□□ 0.62
PLOD3-209ENST00000460475 ZNF318Q5VUA4 2279 aa18.9■□□□□ 0.62
PLOD3-209ENST00000460475 SOBPA7XYQ1 873 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 PRR33A8MZF0 331 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 AFPP02771 609 aaKnown RBP18.89■□□□□ 0.61
PLOD3-209ENST00000460475 GRIK1P39086 918 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 CETN1Q12798 172 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 BMP8AQ7Z5Y6 402 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 FAM35AQ86V20 835 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 SMARCD2Q92925 531 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 ELSPBP1Q96BH3 223 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 CNOT6LQ96LI5 555 aaKnown RBP18.89■□□□□ 0.61
PLOD3-209ENST00000460475 TTLL2Q9BWV7 592 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 THAP9Q9H5L6 903 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 CISHQ9NSE2 258 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 UXTQ9UBK9 157 aaPredicted RBP18.89■□□□□ 0.61
PLOD3-209ENST00000460475 ANAPC1Q9H1A4 1944 aa18.89■□□□□ 0.61
PLOD3-209ENST00000460475 NUP210Q8TEM1 1887 aaPredicted RBP18.88■□□□□ 0.61
PLOD3-209ENST00000460475 F8VP50 259 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 CLDN5O00501 218 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 SRFP11831 508 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 CD58P19256 250 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 TRIM21P19474 475 aaKnown RBP18.88■□□□□ 0.61
PLOD3-209ENST00000460475 CACNA2D1P54289 1103 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 CUL2Q13617 745 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 CCDC183Q5T5S1 534 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 TANGO2Q6ICL3 276 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 ARID3AQ99856 593 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 LRFN3Q9BTN0 628 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 TASP1Q9H6P5 420 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 SLC2A4RGQ9NR83 387 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 ATP8B3O60423 1300 aa18.88■□□□□ 0.61
PLOD3-209ENST00000460475 TMEM221A6NGB7 291 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 M0R296 226 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 NARSO43776 548 aaKnown RBP18.87■□□□□ 0.61
PLOD3-209ENST00000460475 TBXAS1P24557 533 aaPredicted RBP18.87■□□□□ 0.61
PLOD3-209ENST00000460475 ANXA13P27216 316 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 ORC1Q13415 861 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 ARHGAP15Q53QZ3 475 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 STXBP5Q5T5C0 1151 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 DENND5BQ6ZUT9 1274 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 UBR7Q8N806 425 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 C12orf29Q8N999 325 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 STKLD1Q8NE28 680 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 ST13P5Q8NFI4 369 aaPredicted RBP18.87■□□□□ 0.61
PLOD3-209ENST00000460475 ZSCAN18Q8TBC5 510 aaPredicted RBP18.87■□□□□ 0.61
PLOD3-209ENST00000460475 SMARCD1Q96GM5 515 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 GCNAQ96QF7 691 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 HNRNPABQ99729 332 aaKnown RBP18.87■□□□□ 0.61
PLOD3-209ENST00000460475 DNAI2Q9GZS0 605 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 ZFP14Q9HCL3 533 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 CSNK1G1Q9HCP0 422 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 EHD2Q9NZN4 543 aa18.87■□□□□ 0.61
PLOD3-209ENST00000460475 MAGED2Q9UNF1 606 aaPredicted RBP18.87■□□□□ 0.61
PLOD3-209ENST00000460475 MUC6Q6W4X9 2439 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 FAM86C2PA6NEL3 165 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 TADA3O75528 432 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 DDX6P26196 483 aaKnown RBP eCLIP18.86■□□□□ 0.61
PLOD3-209ENST00000460475 TPD52L1Q16890 204 aaPredicted RBP18.86■□□□□ 0.61
PLOD3-209ENST00000460475 GPR158Q5T848 1215 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 SLC4A11Q8NBS3 891 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 SLC2A14Q8TDB8 520 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 E2F7Q96AV8 911 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 NT5C1BQ96P26 610 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 KXD1Q9BQD3 176 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 PLA2G2FQ9BZM2 168 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 SLITRK6Q9H5Y7 841 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 DMAP1Q9NPF5 467 aaPredicted RBP18.86■□□□□ 0.61
PLOD3-209ENST00000460475 IL37Q9NZH6 218 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 TMEM63CQ9P1W3 806 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 WNT16Q9UBV4 365 aa18.86■□□□□ 0.61
PLOD3-209ENST00000460475 TNFRSF10BO14763 440 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 CCDC130P13994 396 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 RAD23BP54727 409 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 USP46P62068 366 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 YWHAEP62258 255 aaKnown RBP18.85■□□□□ 0.61
PLOD3-209ENST00000460475 CYP4F8P98187 520 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 LRMPQ12912 555 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 SASS6Q6UVJ0 657 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 MON1AQ86VX9 555 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 ARID3BQ8IVW6 561 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-209ENST00000460475 FAM114A1Q8IWE2 563 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 ZMIZ2Q8NF64 920 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 ENOX1Q8TC92 643 aaKnown RBP18.85■□□□□ 0.61
PLOD3-209ENST00000460475 CYFIP2Q96F07 1278 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 TMEM176AQ96HP8 235 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 KCNK16Q96T55 309 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 SMOQ99835 787 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 SLC46A2Q9BY10 475 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 FAM49BQ9NUQ9 324 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 ANO10Q9NW15 660 aa18.85■□□□□ 0.61
PLOD3-209ENST00000460475 CACNA1HO95180 2353 aa18.84■□□□□ 0.61
PLOD3-209ENST00000460475 GTPBP10A4D1E9 387 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms