RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CD4P01730 458 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 THP07101 528 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 CD48P09326 243 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 BASP1P80723 227 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 GPS1Q13098 491 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 UAP1Q16222 522 aaPredicted RBP9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 DCAF6Q58WW2 860 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 MDH1BQ5I0G3 518 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 RNF180Q86T96 592 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 SCN4BQ8IWT1 228 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 SIX6OS1Q8N1H7 587 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 MGARPQ8TDB4 240 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 PADI3Q9ULW8 664 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 TTLL3Q9Y4R7 772 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 MYO7AQ13402 2215 aa9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 ZNFX1Q9P2E3 1918 aaKnown RBP9.84□□□□□ -0.83
NUDCD3-203ENST00000460110 TMEM191CA6NGB0 347 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 SPTLC1O15269 473 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 MEFVO15553 781 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 HSPA6P17066 643 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 MIPP30301 263 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ATICP31939 592 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 NRLP54845 237 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 MAP3K7CLP57077 242 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ITIH3Q06033 890 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 KYAT1Q16773 422 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 PLEKHA7Q6IQ23 1121 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 FAM183BPQ6ZVS7 135 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 FAM131BQ86XD5 332 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 SH3TC2Q8TF17 1288 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ZNF560Q96MR9 790 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 PAIP2Q9BPZ3 127 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 PAAF1Q9BRP4 392 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 MED4Q9NPJ6 270 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 GDF3Q9NR23 364 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 FAM105AQ9NUU6 356 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 DNPEPQ9ULA0 475 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 TRIM17Q9Y577 477 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 TLL2Q9Y6L7 1015 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 CREB3O43889 395 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 BRCC3P46736 316 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ARSEP51690 589 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ATXN1P54253 815 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 PIGHQ14442 188 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 SOWAHAQ2M3V2 549 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 DARS2Q6PI48 645 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ABI1Q8IZP0 508 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 C3orf20Q8ND61 904 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 SNX27Q96L92 541 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 FAM193BQ96PV7 902 aaPredicted RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 SEMA4AQ9H3S1 761 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 CYP3A43Q9HB55 503 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ASNSD1Q9NWL6 643 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 SEPT10Q9P0V9 454 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ANKRD65E5RJM6 399 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 CLCNKBP51801 687 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 ITGA7Q13683 1181 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 KYNUQ16719 465 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 P3H1Q32P28 736 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 FAXCQ5TGI0 409 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 NME8Q8N427 588 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 RASGEF1CQ8N431 466 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 FAM172AQ8WUF8 416 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 RBM41Q96IZ5 413 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 DNAI2Q9GZS0 605 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 VPS37BQ9H9H4 285 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 MLXIPLQ9NP71 852 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 KCNK9Q9NPC2 374 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 PPANQ9NQ55 473 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 DDX43Q9NXZ2 648 aaKnown RBP9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 RSPH14Q9UHP6 348 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 TRPV2Q9Y5S1 764 aa9.83□□□□□ -0.84
NUDCD3-203ENST00000460110 POC1B-GALNT4F8VUJ3 575 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 PODXLO00592 558 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 LSM8O95777 96 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 HOXD10P28358 340 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 ITGA8P53708 1063 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 SLC29A2Q14542 456 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 CNGA2Q16280 664 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 FAM187BQ17R55 369 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 ACTL9Q8TC94 416 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 DYDC1Q8WWB3 177 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 MAIP1Q8WWC4 291 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 DDX27Q96GQ7 796 aaKnown RBP9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 SENP8Q96LD8 212 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 STARD7Q9NQZ5 370 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 FEZ2Q9UHY8 353 aaPredicted RBP9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 NUDT5Q9UKK9 219 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 USP18Q9UMW8 372 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 GPD1P21695 349 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 OR1G1P47890 313 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 PMS2P54278 862 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 LILRA4P59901 499 aa9.82□□□□□ -0.84
NUDCD3-203ENST00000460110 GNGT1P63211 74 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms