RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 COL4A2P08572 1712 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 A0A1B0GTH6 734 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 F8VP50 259 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 GOLGA6L19H0YKK7 550 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 AP1G2O75843 785 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 RHOP08100 348 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 KRT5P13647 590 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 CEBPBP17676 345 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
COL18A1-206ENST00000459895 CCR2P41597 374 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 TUFMP49411 452 aaKnown RBP13.62□□□□□ -0.23
COL18A1-206ENST00000459895 TPM4P67936 248 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 ZP2Q05996 745 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 MTMR3Q13615 1198 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 VEPH1Q14D04 833 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 ARHGAP44Q17R89 818 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 PRSS36Q5K4E3 855 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 PPP1R26Q5T8A7 1209 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-206ENST00000459895 CYP26C1Q6V0L0 522 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 ELMOD1Q8N336 334 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 ING5Q8WYH8 240 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 SHC3Q92529 594 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 PSMG2Q969U7 264 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 NECAB3Q96P71 396 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-206ENST00000459895 ASAH2Q9NR71 780 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 FAM207AQ9NSI2 230 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-206ENST00000459895 DNAJC12Q9UKB3 198 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 FAM50BQ9Y247 325 aa13.62□□□□□ -0.23
COL18A1-206ENST00000459895 RNF225M0QZC1 329 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-206ENST00000459895 TRIM66O15016 1216 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 TEX33O43247 280 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 TADA3O75528 432 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 NOL4O94818 638 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 BMP1P13497 986 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 UCHL3P15374 230 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 CD19P15391 556 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 RFX1P22670 979 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 EPHB3P54753 998 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 EPHA5P54756 1037 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 MFAP3P55082 362 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 RPL10AP62906 217 aaKnown RBP13.61□□□□□ -0.23
COL18A1-206ENST00000459895 UBXN1Q04323 297 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ATAT1Q5SQI0 421 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 KLHDC7AQ5VTJ3 777 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 VSTM1Q6UX27 236 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 CLEC20AQ6ZU45 233 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 PDZD4Q76G19 769 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 GPRIN1Q7Z2K8 1008 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 TTC30AQ86WT1 665 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ZMIZ2Q8NF64 920 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ADAMTS19Q8TE59 1207 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 TFAP2BQ92481 460 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 JAKMIP2Q96AA8 810 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 TCEAL4Q96EI5 215 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 SMOQ99835 787 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ZSWIM1Q9BR11 485 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 NAA15Q9BXJ9 866 aaKnown RBP13.61□□□□□ -0.23
COL18A1-206ENST00000459895 LRRC3Q9BY71 257 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 DMAP1Q9NPF5 467 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-206ENST00000459895 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 PLCB1Q9NQ66 1216 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
COL18A1-206ENST00000459895 CNTN6Q9UQ52 1028 aa13.61□□□□□ -0.23
COL18A1-206ENST00000459895 LRRC10BA6NIK2 292 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 C2CD4DB7Z1M9 353 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 F8VZ95 297 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 O00370 1275 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 BEST1O76090 585 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 SERPINC1P01008 464 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 PAEPP09466 180 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 FAM200BP0CF97 657 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 MYL4P12829 197 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 HMGA1P17096 107 aaKnown RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 GJA1P17302 382 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 TRIM21P19474 475 aaKnown RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 FSHRP23945 695 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 ANXA13P27216 316 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 GRIK1P39086 918 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 USP46P62068 366 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 FANCCQ00597 558 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 SGO2Q562F6 1265 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 ITIH5Q86UX2 942 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 ADHFE1Q8IWW8 467 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 NPAS3Q8IXF0 933 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 TDRD5Q8NAT2 981 aaKnown RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 C8orf48Q96LL4 319 aa13.6□□□□□ -0.23
COL18A1-206ENST00000459895 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
COL18A1-206ENST00000459895 NAP1L5Q96NT1 182 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms