RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	C4orf50	Q6ZRC1	276 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	SCN4B	Q8IWT1	228 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	CCDC150	Q8NCX0	1101 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	TFAP2B	Q92481	460 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	FGF13	Q92913	245 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	TNIP3	Q96KP6	325 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	KCNK16	Q96T55	309 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	HNRNPAB	Q99729	332 aa	Known RBP	10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	NT5C1A	Q9BXI3	368 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	VPS16	Q9H269	839 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	SMOC2	Q9H3U7	446 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	CBX8	Q9HC52	389 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	KRT82	Q9NSB4	513 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	LIMA1	Q9UHB6	759 aa	Known RBP	10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	UST	Q9Y2C2	406 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	PTPRD	P23468	1912 aa		10.91	□□□□□ -0.66
MRPL55-223	ENST00000459783	DOCK8	Q8NF50	2099 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783		A0A1W2PRU2	124 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	HHLA1	C9JL84	531 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	TNFRSF10B	O14763	440 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	EPHB6	O15197	1021 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	LETM1	O95202	739 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	F11	P03951	625 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	PNMA6A	P0CW24	399 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	LAMP2	P13473	410 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	TBXAS1	P24557	533 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	ADORA2B	P29275	332 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	COPB1	P53618	953 aa	Known RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	CYP4F8	P98187	520 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	TEAD2	Q15562	447 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	MAPRE1	Q15691	268 aa	Known RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	PTPN21	Q16825	1174 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	EXOC3L4	Q17RC7	722 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	VSTM1	Q6UX27	236 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	GBP6	Q6ZN66	633 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	GPRIN1	Q7Z2K8	1008 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	LUZP1	Q86V48	1076 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	TTC30A	Q86WT1	665 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	RNF135	Q8IUD6	432 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	ZDHHC14	Q8IZN3	488 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	TDRD5	Q8NAT2	981 aa	Known RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	RSAD2	Q8WXG1	361 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	CYFIP2	Q96F07	1278 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	TMEM176A	Q96HP8	235 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	SPATA17	Q96L03	361 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	C8orf48	Q96LL4	319 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	MYRFL	Q96LU7	910 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	ZNF512	Q96ME7	567 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	RPP25	Q9BUL9	199 aa	Known RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	CSNK1G1	Q9HCP0	422 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	ACP6	Q9NPH0	428 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	ASAH2	Q9NR71	780 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	EPS15L1	Q9UBC2	864 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	LIMD1	Q9UGP4	676 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	CDH7	Q9ULB5	785 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	CNTN6	Q9UQ52	1028 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	SIK3	Q9Y2K2	1263 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	MRPS23	Q9Y3D9	190 aa	Known RBP	10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	ASB3	Q9Y575	518 aa		10.9	□□□□□ -0.66
MRPL55-223	ENST00000459783	LRRC10B	A6NIK2	292 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	ANHX	E9PGG2	379 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	TULP2	O00295	520 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	FCAR	P24071	287 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	GABRR2	P28476	465 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	GBP2	P32456	591 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	SSTR3	P32745	418 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	GRIK1	P39086	918 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	PGF	P49763	221 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	RPL10A	P62906	217 aa	Known RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	HTR4	Q13639	388 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	IQCE	Q6IPM2	695 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	TMEM270	Q6UE05	265 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	PARM1	Q6UWI2	310 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	CLEC20A	Q6ZU45	233 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	PDZD4	Q76G19	769 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	OTOP3	Q7RTS5	596 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	ELMOD1	Q8N336	334 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	SCAMP5	Q8TAC9	235 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM200A	Q8TCP9	573 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	SHC3	Q92529	594 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	FGF14	Q92915	247 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	RSPRY1	Q96DX4	576 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	MCRS1	Q96EZ8	462 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	SMARCD1	Q96GM5	515 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	MED10	Q9BTT4	135 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	TTLL2	Q9BWV7	592 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	NAA15	Q9BXJ9	866 aa	Known RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	GPR88	Q9GZN0	384 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	GAN	Q9H2C0	597 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	APEX2	Q9UBZ4	518 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	MUTYH	Q9UIF7	546 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	FHOD1	Q9Y613	1164 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	C5orf42	Q9H799	3197 aa		10.89	□□□□□ -0.67
MRPL55-223	ENST00000459783	LGALS16	A8MUM7	142 aa		10.88	□□□□□ -0.67
MRPL55-223	ENST00000459783		O00370	1275 aa		10.88	□□□□□ -0.67

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