RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 PIK3C3Q8NEB9 887 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 OR2I1PQ8NGU4 316 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 LRTOMTQ8WZ04 291 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 GCDHQ92947 438 aaPredicted RBP6.55□□□□□ -1.36
DDX1-204ENST00000459706 ZC3H10Q96K80 434 aaKnown RBP6.55□□□□□ -1.36
DDX1-204ENST00000459706 CLPTM1LQ96KA5 538 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 MRGPRX4Q96LA9 322 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 SYT3Q9BQG1 590 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 SGPP1Q9BX95 441 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 KRT23Q9C075 422 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 OR10A2Q9H208 303 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 WDCPQ9H6R7 721 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 CDC42EP3Q9UKI2 254 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 FAM50BQ9Y247 325 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 NR2E3Q9Y5X4 410 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 CYP46A1Q9Y6A2 500 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 COL4A5P29400 1685 aa6.55□□□□□ -1.36
DDX1-204ENST00000459706 COL2A1P02458 1487 aaPredicted RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 WDR19Q8NEZ3 1342 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 YDJCA8MPS7 323 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 PSMD14O00487 310 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 PHGDHO43175 533 aaKnown RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 ALDH1A2O94788 518 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 CASTP20810 708 aaKnown RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 ADSLP30566 484 aaPredicted RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 LIMS1P48059 325 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 TM4SF4P48230 202 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 NKX6-1P78426 367 aaPredicted RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 CXCL9Q07325 125 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 NOGQ13253 232 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 USP10Q14694 798 aaKnown RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 CNKSR3Q6P9H4 555 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 Q6ZVL8 140 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 RUFY3Q7L099 469 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 RSPH3Q86UC2 560 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 TEX11Q8IYF3 940 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 FAM186BQ8IYM0 893 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 SPICE1Q8N0Z3 855 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 CERS5Q8N5B7 392 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 BHLHE22Q8NFJ8 381 aaPredicted RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 NCOA7Q8NI08 942 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 ZNF384Q8TF68 577 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 PGBD4Q96DM1 585 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 JAKMIP1Q96N16 626 aaKnown RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 NEK1Q96PY6 1258 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 NAA15Q9BXJ9 866 aaKnown RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 LRRC27Q9C0I9 530 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 ALDH8A1Q9H2A2 487 aaPredicted RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 SLC6A15Q9H2J7 730 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 LANCL2Q9NS86 450 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 TMEM140Q9NV12 185 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 GPRC5DQ9NZD1 345 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 TMOD2Q9NZR1 351 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 TRPS1Q9UHF7 1281 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 MAGEL2Q9UJ55 1249 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 ANAPC4Q9UJX5 808 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 ADAM29Q9UKF5 820 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
DDX1-204ENST00000459706 ROBO3Q96MS0 1386 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 ADAMTSL1Q8N6G6 1762 aa6.54□□□□□ -1.36
DDX1-204ENST00000459706 ISM1B1AKI9 464 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 E7EWF7 191 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 RFXAPO00287 272 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 PQBP1O60828 265 aaKnown RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 RAD17O75943 681 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 HLA-DOAP06340 250 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 VSIG10L2P0DP72 767 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 PEX2P28328 305 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 MCM5P33992 734 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 SREBF1P36956 1147 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 SLC6A9P48067 706 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 STAT5BP51692 787 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 RBM5P52756 815 aaKnown RBP eCLIP6.53□□□□□ -1.36
DDX1-204ENST00000459706 RAB1AP62820 205 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 DYNLL1P63167 89 aaKnown RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 DLGAP5Q15398 846 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 AKNAD1Q5T1N1 836 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 FKBP1CQ5VVH2 108 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 MFSD6Q6ZSS7 791 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 GPC2Q8N158 579 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 PQLC1Q8N2U9 271 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 ENAHQ8N8S7 591 aaPredicted RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 NUDT10Q8NFP7 164 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 SDR42E1Q8WUS8 393 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 KAT5Q92993 513 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 NUDT11Q96G61 164 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 APIPQ96GX9 242 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 FAM84AQ96KN4 292 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 ZSCAN31Q96LW9 406 aaPredicted RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 SAMD11Q96NU1 681 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 UHRF1Q96T88 793 aaPredicted RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 BHMT2Q9H2M3 363 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 DHX36Q9H2U1 1008 aaKnown RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 LMBRD1Q9NUN5 540 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 PNPOQ9NVS9 261 aa6.53□□□□□ -1.36
DDX1-204ENST00000459706 SIDT1Q9NXL6 827 aaKnown RBP6.53□□□□□ -1.36
DDX1-204ENST00000459706 MOCS1Q9NZB8 636 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms