RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LNX1Q8TBB1 728 aaPredicted RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 SPPL2BQ8TCT7 592 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC2A14Q8TDB8 520 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 MICAL1Q8TDZ2 1067 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 RNF139Q8WU17 664 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 BADQ92934 168 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 RNF34Q969K3 372 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 FUBP3Q96I24 572 aaKnown RBP eCLIP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 EMILIN2Q9BXX0 1053 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 UBXN6Q9BZV1 441 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 LACRTQ9GZZ8 138 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 NRDE2Q9H7Z3 1164 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 KRT82Q9NSB4 513 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 HOMER3Q9NSC5 361 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 RRN3Q9NYV6 651 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC12A6Q9UHW9 1150 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 CDC23Q9UJX2 597 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 AJAP1Q9UKB5 411 aaPredicted RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 L1RE1Q9UN81 338 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 USTQ9Y2C2 406 aa6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TIMM13Q9Y5L4 95 aaPredicted RBP6.15□□□□□ -1.42
RNU1-88P-201ENST00000459274 TET1Q8NFU7 2136 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GRID2IPA4D2P6 1211 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TRIM43BA6NCK2 446 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MEIS3P2A8K0S8 358 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CES2O00748 559 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PRRG1O14668 218 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ENC1O14682 589 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GABRDO14764 452 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PRPSAP2O60256 369 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CEP104O60308 925 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 DDHD2O94830 711 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 OAZ2O95190 189 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZRANB2O95218 330 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 FTCDO95954 541 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GALTP07902 379 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GLI1P08151 1106 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RALAP11233 206 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PDGFRAP16234 1089 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ATP2A2P16615 1042 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CHRNB2P17787 502 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GPD1P21695 349 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RRM1P23921 792 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ACAT1P24752 427 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 LMO2P25791 158 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SSTR3P32745 418 aaPredicted RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CDH5P33151 784 aaPredicted RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SCNN1AP37088 669 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ALDH1A3P47895 512 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GLUD2P49448 558 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 DNA2P51530 1060 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TERF1P54274 439 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAP3K7CLP57077 242 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 WDR5P61964 334 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 YWHAZP63104 245 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC6A3Q01959 620 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 LMNB2Q03252 620 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PDE4CQ08493 712 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MTA1Q13330 715 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PDCLQ13371 301 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PLD1Q13393 1074 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ORC1Q13415 861 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAMLD1Q13495 774 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TCEAL1Q15170 157 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MGAT5BQ3V5L5 792 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC39A12Q504Y0 691 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 INTS6LQ5JSJ4 861 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 BTBD8Q5XKL5 378 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SCYL2Q6P3W7 929 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TRAF7Q6Q0C0 670 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MON1BQ7L1V2 547 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RSRC2Q7L4I2 434 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TMC7Q7Z402 723 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ZNF280BQ86YH2 543 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RCOR2Q8IZ40 523 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 UBR7Q8N806 425 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 C12orf29Q8N999 325 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 STKLD1Q8NE28 680 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 GSTCDQ8NEC7 633 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RIN2Q8WYP3 895 aaPredicted RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TFAP2BQ92481 460 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 DDX1Q92499 740 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RABGGTAQ92696 567 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 TRIM43Q96BQ3 446 aaPredicted RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RBM41Q96IZ5 413 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 FAM84AQ96KN4 292 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CEP295NLQ96MC4 621 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RUNDC3BQ96NL0 473 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 MCEEQ96PE7 176 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLITRK1Q96PX8 696 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 CDK5RAP1Q96SZ6 601 aaKnown RBP6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 RAD9AQ99638 391 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PACSIN1Q9BY11 444 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 NACA2Q9H009 215 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 SDCBP2Q9H190 292 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 ABCB6Q9NP58 842 aa6.14□□□□□ -1.43
RNU1-88P-201ENST00000459274 PNPLA8Q9NP80 782 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms