RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 WNT6Q9Y6F9 365 aa16.34■□□□□ 0.21
CROCCP4-201ENST00000457096 CLDN5O00501 218 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 KIAA0391O15091 583 aaKnown RBP16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 KLRC4O43908 158 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 EGFP01133 1207 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 GRIK1P39086 918 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 RAP1GAPP47736 663 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 ZXDBP98169 803 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 PSMD6Q15008 389 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 CFAP221Q4G0U5 840 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 MAMSTRQ6ZN01 415 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 XXYLT1Q8NBI6 393 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 MSANTD3Q96H12 275 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 PCED1BQ96HM7 432 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 MYRFLQ96LU7 910 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 FNBP1Q96RU3 617 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 MAGEC2Q9UBF1 373 aaPredicted RBP16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 NXF1Q9UBU9 619 aaKnown RBP16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 USP18Q9UMW8 372 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 DENND4CQ5VZ89 1909 aa16.33■□□□□ 0.2
CROCCP4-201ENST00000457096 ACTN4O43707 911 aaKnown RBP16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 CKMP06732 381 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 DDX6P26196 483 aaKnown RBP eCLIP16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 CDH8P55286 799 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 IFRD2Q12894 506 aaPredicted RBP16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 STK4Q13043 487 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 MTF1Q14872 753 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 SURF1Q15526 300 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 ZNF77Q15935 545 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 WDR72Q3MJ13 1102 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 KIAA0895Q8NCT3 520 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 EZH1Q92800 747 aaPredicted RBP16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 TRMT2BQ96GJ1 504 aaKnown RBP16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 ZNF518BQ9C0D4 1074 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 LINC00597Q9H2U6 94 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 SMYD3Q9H7B4 428 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 FAM13BQ9NYF5 915 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
CROCCP4-201ENST00000457096 TRAV19A0A0A6YYK7 116 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 F8VP50 259 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 GNL1P36915 607 aaPredicted RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 MAGEA11P43364 429 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 GALK1P51570 392 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 NRLP54845 237 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 SIM2Q14190 667 aaPredicted RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 KNOP1Q1ED39 458 aaKnown RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 TMEM196Q5HYL7 178 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 DGKKQ5KSL6 1271 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 TDRD10Q5VZ19 366 aaKnown RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 SCARA5Q6ZMJ2 495 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 DPH6Q7L8W6 267 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 DGLUCYQ7Z3D6 616 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 SH3RF2Q8TEC5 729 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 PAGE5Q96GU1 130 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 FUBP3Q96I24 572 aaKnown RBP eCLIP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 FAM126AQ9BYI3 521 aaPredicted RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 SDCBP2Q9H190 292 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 XYLT2Q9H1B5 865 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 SNX25Q9H3E2 840 aa16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 DUS2Q9NX74 493 aaKnown RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 UXTQ9UBK9 157 aaPredicted RBP16.31■□□□□ 0.2
CROCCP4-201ENST00000457096 UBE4BO95155 1302 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 LRRIQ3A6PVS8 624 aaPredicted RBP16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 EXOC3O60645 756 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 RNF40O75150 1001 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 USP17L7P0C7H9 530 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 PRR29P0C7W0 189 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 PTPN1P18031 435 aaKnown RBP16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 GJA4P35212 333 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 DLG4P78352 724 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 FAM160A1Q05DH4 1040 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 USP4Q13107 963 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 ORC1Q13415 861 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 PPP2R5DQ14738 602 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 BMT2Q1RMZ1 405 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 KMT5BQ4FZB7 885 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 ECT2Q9H8V3 914 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 KIF9Q9HAQ2 790 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 MAGEF1Q9HAY2 307 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 GMEB2Q9UKD1 530 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 ZDHHC9Q9Y397 364 aa16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.3■□□□□ 0.2
CROCCP4-201ENST00000457096 TRDMT1O14717 391 aaKnown RBP16.29■□□□□ 0.2
CROCCP4-201ENST00000457096 PHACTR2O75167 634 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms