RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 DRICH1Q6PGQ1 229 aaPredicted RBP7.9□□□□□ -1.14
ERCC3-204ENST00000456257 FBXO38Q6PIJ6 1188 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 OLFML1Q6UWY5 402 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 BEND5Q7L4P6 421 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 SLC26A9Q7LBE3 791 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 CPNE8Q86YQ8 564 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 SLC13A5Q86YT5 568 aaPredicted RBP7.9□□□□□ -1.14
ERCC3-204ENST00000456257 RHOT1Q8IXI2 618 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 PRELID2Q8N945 189 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
ERCC3-204ENST00000456257 B3GALNT2Q8NCR0 500 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.9□□□□□ -1.14
ERCC3-204ENST00000456257 UBA3Q8TBC4 463 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 FAM71BQ8TC56 605 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 SEPT8Q92599 483 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 NT5C3BQ969T7 300 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 BTBD6Q96KE9 485 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 CAPZA3Q96KX2 299 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 RNPC3Q96LT9 517 aaKnown RBP7.9□□□□□ -1.14
ERCC3-204ENST00000456257 CASD1Q96PB1 797 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 CNPY3Q9BT09 278 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 LRRC1Q9BTT6 524 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 B3GNT5Q9BYG0 378 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 LRRC19Q9H756 370 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 PNPLA8Q9NP80 782 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 GDF3Q9NR23 364 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 ASNSD1Q9NWL6 643 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 PCYOX1Q9UHG3 505 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 PCDHB8Q9UN66 801 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 NR2E1Q9Y466 385 aa7.9□□□□□ -1.14
ERCC3-204ENST00000456257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 C3orf70A6NLC5 250 aaPredicted RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 DCDC2CA8MYV0 355 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 HHLA1C9JL84 531 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 F8VP50 259 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 M0QYV0 167 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TULP2O00295 520 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PAPSS1O43252 624 aaPredicted RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TBC1D4O60343 1298 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 ATP2C2O75185 946 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 B3GAT3O94766 335 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 FGGP02679 453 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 HSPA8P11142 646 aaKnown RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 SSTR3P32745 418 aaPredicted RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 RFC2P35250 354 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PTPN9P43378 593 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 MARCKSL1P49006 195 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 ARSEP51690 589 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 CLCN6P51797 869 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TAS2R40P59535 323 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 SLC6A3Q01959 620 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TCTN1Q2MV58 587 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 GOLGA7BQ2TAP0 167 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TEX35Q5T0J7 233 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PM20D1Q6GTS8 502 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TRNP1Q6NT89 227 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 DNAJC24Q6P3W2 148 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 CYP4V2Q6ZWL3 525 aaPredicted RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 MYCBPAPQ8TBZ2 947 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 HDAC7Q8WUI4 952 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 MAIP1Q8WWC4 291 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PNKPQ96T60 521 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PSMB7Q99436 277 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PAAF1Q9BRP4 392 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 DDX23Q9BUQ8 820 aaKnown RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 PLVAPQ9BX97 442 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 DPEP3Q9H4B8 488 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 CRTAC1Q9NQ79 661 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 HOMER3Q9NSC5 361 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 ZNF446Q9NWS9 450 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 DDX56Q9NY93 547 aaKnown RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 SMARCAL1Q9NZC9 954 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 HESX1Q9UBX0 185 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TJP2Q9UDY2 1190 aa7.89□□□□□ -1.15
ERCC3-204ENST00000456257 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 DMGDHQ9UI17 866 aaKnown RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 V9GYY5 206 aaPredicted RBP7.89□□□□□ -1.15
ERCC3-204ENST00000456257 TTC3P53804 2025 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 FRMPD3Q5JV73 1810 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 E5RJQ4 531 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 KRIT1O00522 736 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 MAP2K7O14733 419 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 SYN3O14994 580 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 KIAA0355O15063 1070 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 HOXA2O43364 376 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 SPOPO43791 374 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 B4GALT3O60512 393 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 LRCH4O75427 683 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 RARAP10276 462 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 NPR3P17342 541 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 TKTP29401 623 aaKnown RBP7.88□□□□□ -1.15
ERCC3-204ENST00000456257 CHRNA3P32297 505 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 PTGIRP43119 386 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 SLC25A11Q02978 314 aaKnown RBP7.88□□□□□ -1.15
ERCC3-204ENST00000456257 ADCY1Q08828 1119 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 CBLBQ13191 982 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 ORC1Q13415 861 aa7.88□□□□□ -1.15
ERCC3-204ENST00000456257 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms