RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 FUBP3Q96I24 572 aaKnown RBP eCLIP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 MMS19Q96T76 1030 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 TRPC7Q9HCX4 862 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 THG1LQ9NWX6 298 aaKnown RBP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 FAM13BQ9NYF5 915 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 NCDNQ9UBB6 729 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 CDH9Q9ULB4 789 aa23.27■■□□□ 1.32
SEC22C-213ENST00000456222 R3HCC1Q9Y3T6 440 aaKnown RBP23.27■■□□□ 1.32
SEC22C-213ENST00000456222 C2orf78A6NCI8 922 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 MAGEA11P43364 429 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 USP46P62068 366 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 SRSF5Q13243 272 aaKnown RBP23.26■■□□□ 1.31
SEC22C-213ENST00000456222 RUNX3Q13761 415 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 LPAL2Q16609 132 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 ELMO3Q96BJ8 720 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 TMEM30AQ9NV96 361 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 ZMYM5Q9UJ78 669 aa23.26■■□□□ 1.31
SEC22C-213ENST00000456222 NCOR2Q9Y618 2525 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 PVALEFA0A1B0GWK0 134 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 CHURC1-FNTBB4DL54 471 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 FNTBP49356 437 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 CACNA2D1P54289 1103 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 DGKKQ5KSL6 1271 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 FSTL4Q6MZW2 842 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 HS2ST1Q7LGA3 356 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 C12orf56Q8IXR9 622 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 KIAA0895Q8NCT3 520 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 PCED1BQ96HM7 432 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 FNBP1Q96RU3 617 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 XYLT2Q9H1B5 865 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 DPEP3Q9H4B8 488 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 FBRSL1Q9HCM7 1045 aaKnown RBP23.25■■□□□ 1.31
SEC22C-213ENST00000456222 GCNT4Q9P109 453 aa23.25■■□□□ 1.31
SEC22C-213ENST00000456222 MAGEC2Q9UBF1 373 aaPredicted RBP23.25■■□□□ 1.31
SEC22C-213ENST00000456222 UXTQ9UBK9 157 aaPredicted RBP23.25■■□□□ 1.31
SEC22C-213ENST00000456222 TGM1P22735 817 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 MYL6P60660 151 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 CYP27A1Q02318 531 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 STK4Q13043 487 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 ZNF268Q14587 947 aaPredicted RBP23.24■■□□□ 1.31
SEC22C-213ENST00000456222 ZNF77Q15935 545 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 KNOP1Q1ED39 458 aaKnown RBP23.24■■□□□ 1.31
SEC22C-213ENST00000456222 MDH1BQ5I0G3 518 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 ATL3Q6DD88 541 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 C4orf50Q6ZRC1 276 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 ARL14EPQ8N8R7 260 aaPredicted RBP23.24■■□□□ 1.31
SEC22C-213ENST00000456222 TTC16Q8NEE8 873 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 PAGE5Q96GU1 130 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 KIF9Q9HAQ2 790 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 ZDHHC9Q9Y397 364 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 MYO16Q9Y6X6 1858 aa23.24■■□□□ 1.31
SEC22C-213ENST00000456222 SOBPA7XYQ1 873 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 HRO43593 1189 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 SLFN14P0C7P3 912 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 NRLP54845 237 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 SNRPFP62306 86 aaKnown RBP23.23■■□□□ 1.31
SEC22C-213ENST00000456222 ZXDBP98169 803 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 MTF1Q14872 753 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 WDR72Q3MJ13 1102 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 HEATR6Q6AI08 1181 aaKnown RBP23.23■■□□□ 1.31
SEC22C-213ENST00000456222 MYCBPAPQ8TBZ2 947 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 PARD6AQ9NPB6 346 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 POLR3BQ9NW08 1133 aaPredicted RBP23.23■■□□□ 1.31
SEC22C-213ENST00000456222 CFAP45Q9UL16 551 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 WNT6Q9Y6F9 365 aa23.23■■□□□ 1.31
SEC22C-213ENST00000456222 TRAV19A0A0A6YYK7 116 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 A0A1B0GVL5 298 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 EXOC3O60645 756 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 TACC1O75410 805 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 PAPSS2O95340 614 aaPredicted RBP23.22■■□□□ 1.31
SEC22C-213ENST00000456222 CKMP06732 381 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 PDIA4P13667 645 aaKnown RBP23.22■■□□□ 1.31
SEC22C-213ENST00000456222 PFKFB1P16118 471 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 GNL1P36915 607 aaPredicted RBP23.22■■□□□ 1.31
SEC22C-213ENST00000456222 GRIK1P39086 918 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 FAM160A1Q05DH4 1040 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 USP4Q13107 963 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 PPP2R5DQ14738 602 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 TMEM196Q5HYL7 178 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 VSTM1Q6UX27 236 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 CEP57L1Q8IYX8 460 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 OR6B3Q8NGW1 331 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 SPATA17Q96L03 361 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 SNX25Q9H3E2 840 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 NXF1Q9UBU9 619 aaKnown RBP23.22■■□□□ 1.31
SEC22C-213ENST00000456222 LAMA1P25391 3075 aa23.22■■□□□ 1.31
SEC22C-213ENST00000456222 F8VP50 259 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 CLDN5O00501 218 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 EGFP01133 1207 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 KMT5BQ4FZB7 885 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 TDRD10Q5VZ19 366 aaKnown RBP23.21■■□□□ 1.31
SEC22C-213ENST00000456222 ZNF518BQ9C0D4 1074 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 SMYD3Q9H7B4 428 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 DMAC2Q9NW81 257 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 EML5Q05BV3 1969 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 RALGAPA1Q6GYQ0 2036 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 SPAG17Q6Q759 2223 aa23.21■■□□□ 1.31
SEC22C-213ENST00000456222 KIAA1549LQ6ZVL6 1849 aa23.2■■□□□ 1.3
SEC22C-213ENST00000456222 LRRIQ3A6PVS8 624 aaPredicted RBP23.2■■□□□ 1.3
SEC22C-213ENST00000456222 TRDMT1O14717 391 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms