RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ATXN2Q99700 1313 aaKnown RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 C2orf78A6NCI8 922 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 TISP43B9A030 160 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 ANKRD63C9JTQ0 380 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 TULP1O00294 542 aaPredicted RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 MAP3K13O43283 966 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 ENGP17813 658 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 ACAT1P24752 427 aaKnown RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 SIM1P81133 766 aaPredicted RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 ATP2C1P98194 919 aaPredicted RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 TMEFF1Q8IYR6 380 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 PDCL2Q8N4E4 241 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 FSIP1Q8NA03 581 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 DDX43Q9NXZ2 648 aaKnown RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 GCNT4Q9P109 453 aa24.96■■□□□ 1.59
PTPRA-208ENST00000455631 AGO2Q9UKV8 859 aaKnown RBP24.96■■□□□ 1.59
PTPRA-208ENST00000455631 TNFRSF10BO14763 440 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 PTGER3P43115 390 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 ZNF131P52739 623 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 INTS6LQ5JSJ4 861 aaKnown RBP24.95■■□□□ 1.58
PTPRA-208ENST00000455631 LMBRD2Q68DH5 695 aaPredicted RBP24.95■■□□□ 1.58
PTPRA-208ENST00000455631 TMEM92Q6UXU6 159 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 SYT12Q8IV01 421 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 OLIG1Q8TAK6 271 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 WHAMMQ8TF30 809 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 TMEM74BQ9NUR3 256 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 BCCIPQ9P287 314 aaKnown RBP eCLIP24.95■■□□□ 1.58
PTPRA-208ENST00000455631 ARHGAP26Q9UNA1 814 aa24.95■■□□□ 1.58
PTPRA-208ENST00000455631 KRT18P05783 430 aaKnown RBP24.94■■□□□ 1.58
PTPRA-208ENST00000455631 HNRNPLP14866 589 aaKnown RBP eCLIP24.94■■□□□ 1.588e-8■■□□□ 13.5
PTPRA-208ENST00000455631 P2RY2P41231 377 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 PNPLA4P41247 253 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 CCDC142Q17RM4 750 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 SCN4BQ8IWT1 228 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 ALLCQ8N6M5 410 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 FNBP1Q96RU3 617 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 ACBD6Q9BR61 282 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 GTF3C4Q9UKN8 822 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 L1RE1Q9UN81 338 aa24.94■■□□□ 1.58
PTPRA-208ENST00000455631 TBCAO75347 108 aaKnown RBP24.93■■□□□ 1.58
PTPRA-208ENST00000455631 CFIP05156 583 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 TCF3P15923 654 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 HDCP19113 662 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 PI4KAP42356 2102 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 MRPS21P82921 87 aaKnown RBP24.93■■□□□ 1.58
PTPRA-208ENST00000455631 GTF2BQ00403 316 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 MYL7Q01449 175 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 LYSMD4Q5XG99 296 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 SLFN12LQ6IEE8 588 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 SPATA2LQ8IUW3 424 aaPredicted RBP24.93■■□□□ 1.58
PTPRA-208ENST00000455631 FRMD1Q8N878 549 aa24.93■■□□□ 1.58
PTPRA-208ENST00000455631 TXNDC5Q8NBS9 432 aaKnown RBP24.93■■□□□ 1.58
PTPRA-208ENST00000455631 PCNX2A6NKB5 2137 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 ADAMTS9Q9P2N4 1935 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 HUS1O60921 280 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 KLF8O95600 359 aaPredicted RBP24.92■■□□□ 1.58
PTPRA-208ENST00000455631 POLR2BP30876 1174 aaKnown RBP24.92■■□□□ 1.58
PTPRA-208ENST00000455631 ABCD1P33897 745 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 ATXN3P54252 364 aaPredicted RBP24.92■■□□□ 1.58
PTPRA-208ENST00000455631 GAB4Q2WGN9 574 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 PIP4P1Q86T03 277 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 HDDC3Q8N4P3 179 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 LRRC15Q8TF66 581 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 PKMYT1Q99640 499 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 POLMQ9NP87 494 aaPredicted RBP24.92■■□□□ 1.58
PTPRA-208ENST00000455631 FSCN3Q9NQT6 498 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 PLXND1Q9Y4D7 1925 aa24.92■■□□□ 1.58
PTPRA-208ENST00000455631 CACNA1EQ15878 2313 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 IL18RAPO95256 599 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 RDXP35241 583 aaKnown RBP24.91■■□□□ 1.58
PTPRA-208ENST00000455631 TIE1P35590 1138 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 DPP6P42658 865 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 PDE6CP51160 858 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 TFAMQ00059 246 aaKnown RBP24.91■■□□□ 1.58
PTPRA-208ENST00000455631 SEMA3BQ13214 749 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 RILPL1Q5EBL4 403 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 SLC23A3Q6PIS1 610 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 NT5DC4Q86YG4 428 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 SFTPA1Q8IWL2 248 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 SPATA18Q8TC71 538 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 HMGB4Q8WW32 186 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 POMGNT1Q8WZA1 660 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 FIZ1Q96SL8 496 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 GTPBP2Q9BX10 602 aaKnown RBP24.91■■□□□ 1.58
PTPRA-208ENST00000455631 MBD1Q9UIS9 605 aaPredicted RBP24.91■■□□□ 1.58
PTPRA-208ENST00000455631 AGAP1Q9UPQ3 857 aa24.91■■□□□ 1.58
PTPRA-208ENST00000455631 MYMKA6NI61 221 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 SGK1O00141 431 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 LEFTY2O00292 366 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 CYP17A1P05093 508 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 ITGB3P05106 788 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 CFAP221Q4G0U5 840 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 MCTP1Q6DN14 999 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 CRELD2Q6UXH1 353 aaPredicted RBP24.9■■□□□ 1.58
PTPRA-208ENST00000455631 TMEM86AQ8N2M4 240 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 PGBD3Q8N328 593 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 IL17RCQ8NAC3 791 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 CALML4Q96GE6 196 aa24.9■■□□□ 1.58
PTPRA-208ENST00000455631 IKZF4Q9H2S9 585 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms