RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ADHFE1Q8IWW8 467 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.88□□□□□ -1.95
LINC02540-201ENST00000455554 WDR66Q8TBY9 1149 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 CHAC2Q8WUX2 184 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 KAT5Q92993 513 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 VRK1Q99986 396 aaPredicted RBP2.88□□□□□ -1.95
LINC02540-201ENST00000455554 THAP7Q9BT49 309 aaPredicted RBP2.88□□□□□ -1.95
LINC02540-201ENST00000455554 EFHD1Q9BUP0 239 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 FAM126AQ9BYI3 521 aaPredicted RBP2.88□□□□□ -1.95
LINC02540-201ENST00000455554 SLAMF7Q9NQ25 335 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 TXLNGQ9NUQ3 528 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 PI4KBQ9UBF8 816 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 SERTAD3Q9UJW9 196 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 LIMCH1Q9UPQ0 1083 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 ICKQ9UPZ9 632 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 TTC3P53804 2025 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 A1L4Q6 167 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 TMEM232C9JQI7 657 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 K7ESF4 209 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 FZD9O00144 591 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 A1BGP04217 495 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 RPLP2P05387 115 aaKnown RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 SMARCA1P28370 1054 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 PPIFP30405 207 aaKnown RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 CDKN2AP42771 156 aaKnown RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 PHKA1P46020 1223 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 PIK3CGP48736 1102 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 RENBPP51606 427 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 RHDQ02161 417 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 KLF1Q13351 362 aaPredicted RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 BOP1Q14137 746 aaKnown RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 KIF22Q14807 665 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 KHDC1Q4VXA5 237 aaKnown RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 MTHFD1LQ6UB35 978 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 USP37Q86T82 979 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 PIM3Q86V86 326 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 NSUN6Q8TEA1 469 aaKnown RBP2.87□□□□□ -1.95
LINC02540-201ENST00000455554 XAGE5Q8WWM1 108 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 ATG4AQ8WYN0 398 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 JADE3Q92613 823 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 GLG1Q92896 1179 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 R3HDM4Q96D70 268 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 CIPCQ9C0C6 399 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 SSX2IPQ9Y2D8 614 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 PHLDB1Q86UU1 1377 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 ZMYM2Q9UBW7 1377 aa2.87□□□□□ -1.95
LINC02540-201ENST00000455554 TCRBV5S1A1TA0A578 114 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 CCDC154A6NI56 674 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 B4DGG1 531 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 M0QYG6 137 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 DLDP09622 509 aaKnown RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 TGFB3P10600 412 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 CYP19A1P11511 503 aaPredicted RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 CPEP16870 476 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 C5AR1P21730 350 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 ME1P48163 572 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 ALDH5A1P51649 535 aaPredicted RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 ZNF91Q05481 1191 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 FAM187BQ17R55 369 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 INAVAQ3KP66 663 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 CT47A1Q5JQC4 288 aaPredicted RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 L1TD1Q5T7N2 865 aaKnown RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 FAM160B1Q5W0V3 765 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 LAYNQ6UX15 382 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 TTC7BQ86TV6 843 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 SPATS2Q86XZ4 545 aaKnown RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 DDX17Q92841 729 aaKnown RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 LENG8Q96PV6 779 aaPredicted RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 FYTTD1Q96QD9 318 aaKnown RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 SIGLEC11Q96RL6 698 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 FAM234AQ9H0X4 552 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 SLCO5A1Q9H2Y9 848 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 TFCP2L1Q9NZI6 479 aa2.86□□□□□ -1.95
LINC02540-201ENST00000455554 CFAP20Q9Y6A4 193 aaKnown RBP2.86□□□□□ -1.95
LINC02540-201ENST00000455554 PCDHGA12O60330 932 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 RNF8O76064 485 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 GNAI2P04899 355 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 FTH1P19P0C7X4 201 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PRDX5P30044 214 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 LOXL3P58215 753 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 FHL3Q13643 280 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 ARHGAP40Q5TG30 622 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 DAB2IPQ5VWQ8 1189 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PGM2L1Q6PCE3 622 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 DEF8Q6ZN54 512 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 SLC15A3Q8IY34 581 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 DCP1BQ8IZD4 617 aaKnown RBP2.85□□□□□ -1.95
LINC02540-201ENST00000455554 CBARPQ8N350 705 aaPredicted RBP2.85□□□□□ -1.95
LINC02540-201ENST00000455554 ZNF548Q8NEK5 533 aaPredicted RBP2.85□□□□□ -1.95
LINC02540-201ENST00000455554 FAM46DQ8NEK8 389 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 OSR1Q8TAX0 266 aaPredicted RBP2.85□□□□□ -1.95
LINC02540-201ENST00000455554 ZNF398Q8TD17 642 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 ADAMTS18Q8TE60 1221 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 SLC46A1Q96NT5 459 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 PTDSS2Q9BVG9 487 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 C1orf43Q9BWL3 253 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 TTYH3Q9C0H2 523 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 HEY2Q9UBP5 337 aa2.85□□□□□ -1.95
LINC02540-201ENST00000455554 ZDHHC8Q9ULC8 765 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms