RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 SLC2A4RGQ9NR83 387 aa18.91■□□□□ 0.62
COPS7A-202ENST00000455113 ZMYM5Q9UJ78 669 aa18.91■□□□□ 0.62
COPS7A-202ENST00000455113 DDR2Q16832 855 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 CCDC40Q4G0X9 1142 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 DCAF17Q5H9S7 520 aaPredicted RBP18.9■□□□□ 0.62
COPS7A-202ENST00000455113 MDH1BQ5I0G3 518 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 FAM78AQ5JUQ0 283 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 FLCNQ8NFG4 579 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 PCED1BQ96HM7 432 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 CRTAC1Q9NQ79 661 aa18.9■□□□□ 0.62
COPS7A-202ENST00000455113 DPYSL4O14531 572 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 TRIM66O15016 1216 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 MOSPD3O75425 235 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
COPS7A-202ENST00000455113 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
COPS7A-202ENST00000455113 BDNFP23560 247 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 MAGEA11P43364 429 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 MXI1P50539 228 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 GPC5P78333 572 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 PPP3CAQ08209 521 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 GPR158Q5T848 1215 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 B3GALNT2Q8NCR0 500 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 SMYD3Q9H7B4 428 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 METTL14Q9HCE5 456 aaKnown RBP18.89■□□□□ 0.61
COPS7A-202ENST00000455113 ZNF334Q9HCZ1 680 aaPredicted RBP18.89■□□□□ 0.61
COPS7A-202ENST00000455113 EHD2Q9NZN4 543 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 LIMA1Q9UHB6 759 aaKnown RBP18.89■□□□□ 0.61
COPS7A-202ENST00000455113 CA14Q9ULX7 337 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 ATP8B3O60423 1300 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 TRIOO75962 3097 aa18.89■□□□□ 0.61
COPS7A-202ENST00000455113 AP5Z1O43299 807 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 GPR15P49685 360 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 CDH8P55286 799 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 MARSP56192 900 aaKnown RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 FANCCQ00597 558 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 KRT31Q15323 416 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 C1orf220Q5T0J3 134 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 TANGO2Q6ICL3 276 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 ANKRD20A12PQ8NF67 263 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 SHDQ96IW2 340 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 CEP295NLQ96MC4 621 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 PRRX2Q99811 253 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 KCNH6Q9H252 994 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 ARMCX3Q9UH62 379 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 SERPINC1P01008 464 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 PDGFBP01127 241 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 PSMC3P17980 439 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 MTIF2P46199 727 aaKnown RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 RAP1GAPP47736 663 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 NOP14P78316 857 aaKnown RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 WDR44Q5JSH3 913 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 SDHAF4Q5VUM1 108 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 APTXQ7Z2E3 356 aaKnown RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 FRMD5Q7Z6J6 570 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 YAF2Q8IY57 180 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 FBXL13Q8NEE6 735 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 TAS1R2Q8TE23 839 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 DEPDC1BQ8WUY9 529 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 MRPS31Q92665 395 aaKnown RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 ZSWIM3Q96MP5 696 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 TRMT61BQ9BVS5 477 aaKnown RBP18.88■□□□□ 0.61
COPS7A-202ENST00000455113 ELOVL4Q9GZR5 314 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 TASP1Q9H6P5 420 aa18.88■□□□□ 0.61
COPS7A-202ENST00000455113 LRRC10BA6NIK2 292 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 DDX6P26196 483 aaKnown RBP eCLIP18.87■□□□□ 0.61
COPS7A-202ENST00000455113 CCDC142Q17RM4 750 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 SARM1Q6SZW1 724 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 UNC93AQ86WB7 457 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 TUBGCP2Q9BSJ2 902 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 MED10Q9BTT4 135 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 DPEP3Q9H4B8 488 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 BRD9Q9H8M2 597 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.87■□□□□ 0.61
COPS7A-202ENST00000455113 ARHGEF3Q9NR81 526 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 TAB2Q9NYJ8 693 aa18.87■□□□□ 0.61
COPS7A-202ENST00000455113 ARIH1Q9Y4X5 557 aaPredicted RBP18.87■□□□□ 0.61
COPS7A-202ENST00000455113 SLC38A8A6NNN8 435 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 AVPR2P30518 371 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 AVPR1AP37288 418 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 CYP4F8P98187 520 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 ASTLQ6HA08 431 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-202ENST00000455113 DENND5BQ6ZUT9 1274 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 ARID3BQ8IVW6 561 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-202ENST00000455113 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 IRF7Q92985 503 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 ELMO3Q96BJ8 720 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 TRMT2BQ96GJ1 504 aaKnown RBP18.86■□□□□ 0.61
COPS7A-202ENST00000455113 SPATA17Q96L03 361 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 CYP3A43Q9HB55 503 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 TRPV4Q9HBA0 871 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 PRKCSHP14314 528 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-202ENST00000455113 HMGA1P17096 107 aaKnown RBP18.86■□□□□ 0.61
COPS7A-202ENST00000455113 CLCN5P51795 746 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 COPB1P53618 953 aaKnown RBP18.86■□□□□ 0.61
COPS7A-202ENST00000455113 STXBP5Q5T5C0 1151 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 TRIM5Q9C035 493 aa18.86■□□□□ 0.61
COPS7A-202ENST00000455113 NIF3L1Q9GZT8 377 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms