RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 PPM1NQ8N819 430 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 TRIML1Q8N9V2 468 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 NCOA7Q8NI08 942 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 ZNF606Q8WXB4 792 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 DDX17Q92841 729 aaKnown RBP5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 ARHGEF2Q92974 986 aaKnown RBP5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 EDC3Q96F86 508 aaKnown RBP5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 WDR89Q96FK6 387 aaPredicted RBP5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 PGBD1Q96JS3 809 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 CNDP2Q96KP4 475 aaKnown RBP5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 DIRC2Q96SL1 478 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 SLF1Q9BQI6 1058 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 CNPPD1Q9BV87 410 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 TXLNGYQ9BZA5 131 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 FANCFQ9NPI8 374 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 PRDM7Q9NQW5 492 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 GJB4Q9NTQ9 266 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 DENND2AQ9ULE3 1009 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 GPR55Q9Y2T6 319 aaPredicted RBP5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 CEP83Q9Y592 693 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 TAF6LQ9Y6J9 622 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 CARMIL3Q8ND23 1372 aa5.91□□□□□ -1.46
PCGEM1-201ENST00000454040 CNTNAP4Q9C0A0 1308 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 ZNF831Q5JPB2 1677 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 LAMB2P55268 1798 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 C17orf113A0A1B0GUU1 675 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 NPC1O15118 1278 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 KDM1AO60341 852 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 SOAT2O75908 522 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 CTDNEP1O95476 244 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 YEATS4O95619 227 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 MT-ND3P03897 115 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 MECOMQ03112 1051 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 SCARB2Q14108 478 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 C5orf22Q49AR2 442 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 LRRC24Q50LG9 513 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 FBXO47Q5MNV8 452 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 MEX3CQ5U5Q3 659 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 SLC30A6Q6NXT4 461 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 BTNL9Q6UXG8 535 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 OTOP1Q7RTM1 612 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 EPHX4Q8IUS5 362 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 CRACR2BQ8N4Y2 399 aaPredicted RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 ZNF610Q8N9Z0 462 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 KIAA1524Q8TCG1 905 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 DDX54Q8TDD1 881 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 KCNG4Q8TDN1 519 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 HERVK_113Q902F9 699 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 UIMC1Q96RL1 719 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 ELF4Q99607 663 aaPredicted RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 C7orf25Q9BPX7 421 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 DPH2Q9BQC3 489 aaPredicted RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 GPATCH1Q9BRR8 931 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 NAT10Q9H0A0 1025 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 QRSL1Q9H0R6 528 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 TRPV4Q9HBA0 871 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 ANO10Q9NW15 660 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 ZNHIT6Q9NWK9 470 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 KIF17Q9P2E2 1029 aa5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 MTF2Q9Y483 593 aaPredicted RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 COL22A1Q8NFW1 1626 aaPredicted RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.9□□□□□ -1.46
PCGEM1-201ENST00000454040 MYH6P13533 1939 aa5.9□□□□□ -1.47
PCGEM1-201ENST00000454040 RREB1Q92766 1687 aa5.9□□□□□ -1.47
PCGEM1-201ENST00000454040 ZNF213O14771 459 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 NDC80O14777 642 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 JAK2O60674 1132 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 KINO60870 393 aaKnown RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 CLASP2O75122 1294 aaKnown RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 KRT37O76014 449 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 CDKL5O76039 1030 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 APBB3O95704 486 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 MYCLP12524 364 aaPredicted RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 ITGA4P13612 1032 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 EDNRBP24530 442 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 GBP1P32455 592 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 TNNT3P45378 269 aaPredicted RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 PIP4K2AP48426 406 aaPredicted RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 ETF1P62495 437 aaKnown RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 FOXO1Q12778 655 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 TRDNQ13061 729 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 PAK1Q13153 545 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 STX1AQ16623 288 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 TIGD6Q17RP2 521 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 FSTL4Q6MZW2 842 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 RPUSD3Q6P087 351 aaKnown RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 DYMQ7RTS9 669 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 KCNK18Q7Z418 384 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 DNAJB7Q7Z6W7 309 aaPredicted RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 PLA2G4DQ86XP0 818 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 MB21D2Q8IYB1 491 aaPredicted RBP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 ENGASEQ8NFI3 743 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 FBXO18Q8NFZ0 1043 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 TTLL11Q8NHH1 800 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 NEK9Q8TD19 979 aa5.89□□□□□ -1.47
PCGEM1-201ENST00000454040 C17orf50Q8WW18 174 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms