RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SEMA7AO75326 666 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 DDX58O95786 925 aaKnown RBP4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 ALAS1P13196 640 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 IDEP14735 1019 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 RXRAP19793 462 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 CHRM3P20309 590 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 KCNA3P22001 575 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 SLC5A2P31639 672 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 KRT9P35527 623 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 UBE3AQ05086 875 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 MAPK7Q13164 816 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 TRPC3Q13507 836 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 RIN1Q13671 783 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 ATP1A4Q13733 1029 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 SSPNQ14714 243 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 IQCB1Q15051 598 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 BTBD16Q32M84 506 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZMAT1Q5H9K5 638 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 ATXN7L2Q5T6C5 722 aaPredicted RBP4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 TTC22Q5TAA0 569 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 ANKRD45Q5TZF3 282 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 CCDC30Q5VVM6 783 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 TAF2Q6P1X5 1199 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 NEK10Q6ZWH5 1172 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 AOPEPQ8N6M6 819 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 TSPYL6Q8N831 410 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 OR6Y1Q8NGX8 325 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 TTYH3Q9C0H2 523 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 PAIP1Q9H074 479 aaKnown RBP4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 SMOC2Q9H3U7 446 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 PLEKHA5Q9HAU0 1116 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 PREBQ9HCU5 417 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 MRPS17Q9Y2R5 130 aaKnown RBP4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 NR2E1Q9Y466 385 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 A0A1W2PPH5 198 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ADM5C9JUS6 153 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 AGPSO00116 658 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 USO1O60763 962 aaKnown RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 TAF5LO75529 589 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 CYP1A1P04798 512 aaPredicted RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ITGB1P05556 798 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 SRGAP2BP0DMP2 458 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZSCAN22P10073 491 aaPredicted RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 XBP1P17861 261 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 PAPOLAP51003 745 aaKnown RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 DGKEP52429 567 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 LILRA4P59901 499 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 DCAF7P61962 342 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 VAMP2P63027 116 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 SLC12A1Q13621 1099 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 INSCQ1MX18 579 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 CCDC184Q52MB2 194 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 MAP3K21Q5TCX8 1036 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 AGAP9Q5VTM2 703 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZNF280DQ6N043 979 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 SLC30A10Q6XR72 485 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 DOK3Q7L591 496 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 TMPRSS9Q7Z410 1059 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAM9BQ8IZU0 186 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ANKRD52Q8NB46 1076 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 POC1BQ8TC44 478 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 BPIFB1Q8TDL5 484 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZNF483Q8TF39 744 aaPredicted RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 SNRNP27Q8WVK2 155 aaKnown RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 RFFLQ8WZ73 363 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 TFAP2CQ92754 450 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 MARS2Q96GW9 593 aaKnown RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZNF512Q96ME7 567 aaPredicted RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 NEU1Q99519 415 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAM83DQ9H4H8 585 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 JMJD4Q9H9V9 463 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 BARX1Q9HBU1 254 aaPredicted RBP4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 G6PC2Q9NQR9 355 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 SMYD2Q9NRG4 433 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 HELLSQ9NRZ9 838 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 HSFX1Q9UBD0 423 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 AASSQ9UDR5 926 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 RABGAP1Q9Y3P9 1069 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 FER1L4A9Z1Z3 1794 aa4.8□□□□□ -1.64
HMGN3P1-201ENST00000453847 A0A087X0M5 115 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 A0A1B0GX30 115 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAM90A20PA6NIJ5 464 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 E7EVH7 732 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 J3KTA2 159 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 K7ENM7 598 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 FIBPO43427 364 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 PPP6R2O75170 966 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 PIAS2O75928 621 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 CNPP09543 421 aaKnown RBP4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 RRM1P23921 792 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 AARSP49588 968 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 MAN2A2P49641 1150 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 CHN2P52757 468 aa4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 ALDH18A1P54886 795 aaKnown RBP4.79□□□□□ -1.64
HMGN3P1-201ENST00000453847 CASP6P55212 293 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms