RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 FEZF2Q8TBJ5 459 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 TFAP2BQ92481 460 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 FMO2Q99518 471 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 HERPUD2Q9BSE4 406 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 BCO2Q9BYV7 579 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 PARVAQ9NVD7 372 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 SNX24Q9Y343 169 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 GJB6O95452 261 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 CALB1P05937 261 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
PKP4-206ENST00000452162 ACTN2P35609 894 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 RPL21P46778 160 aaKnown RBP11.32□□□□□ -0.6
PKP4-206ENST00000452162 TAS2R40P59535 323 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
PKP4-206ENST00000452162 DHX9Q08211 1270 aaKnown RBP11.32□□□□□ -0.6
PKP4-206ENST00000452162 SPDYCQ5MJ68 293 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 WDTC1Q8N5D0 677 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.32□□□□□ -0.6
PKP4-206ENST00000452162 PHOSPHO2Q8TCD6 241 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 SLCO2A1Q92959 643 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 TOP1MTQ969P6 601 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 RGS18Q9NS28 235 aa11.32□□□□□ -0.6
PKP4-206ENST00000452162 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
PKP4-206ENST00000452162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
PKP4-206ENST00000452162 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 C9IYK1 514 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 O00370 1275 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 GJB5O95377 273 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
PKP4-206ENST00000452162 GBP1P32455 592 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 SKOR1P84550 965 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 JADE1Q6IE81 842 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 KATNAL2Q8IYT4 538 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 TMEM130Q8N3G9 435 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 MAIP1Q8WWC4 291 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 CPB2Q96IY4 423 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
PKP4-206ENST00000452162 FNDC1Q4ZHG4 1894 aaPredicted RBP11.31□□□□□ -0.6
PKP4-206ENST00000452162 TSPAN1O60635 241 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 ERLIN2O94905 339 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 SMAD3P84022 425 aaKnown RBP11.31□□□□□ -0.6
PKP4-206ENST00000452162 ZNF844Q08AG5 666 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 ZNF252P-AS1Q0IIN9 211 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 CEP85LQ5SZL2 805 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 CCDC105Q8IYK2 499 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 CRIPAKQ8N1N5 446 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 FBXO25Q8TCJ0 367 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 SDCBP2Q9H190 292 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 ASB7Q9H672 318 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
PKP4-206ENST00000452162 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
PKP4-206ENST00000452162 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 KCNJ1P48048 391 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 RPL7AP62424 266 aaKnown RBP11.3□□□□□ -0.6
PKP4-206ENST00000452162 KLF1Q13351 362 aaPredicted RBP11.3□□□□□ -0.6
PKP4-206ENST00000452162 KYAT1Q16773 422 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 SGO2Q562F6 1265 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 ZNF667Q5HYK9 610 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 EMC10Q5UCC4 262 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 TWF2Q6IBS0 349 aaKnown RBP11.3□□□□□ -0.6
PKP4-206ENST00000452162 DENND1BQ6P3S1 775 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 SLC24A5Q71RS6 500 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 OR2W6PQ8NHA6 318 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 UBLCP1Q8WVY7 318 aaPredicted RBP11.3□□□□□ -0.6
PKP4-206ENST00000452162 C1orf54Q8WWF1 131 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 EPB41L4BQ9H329 900 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 VRTNQ9H8Y1 702 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 CHST12Q9NRB3 414 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
PKP4-206ENST00000452162 TLL1O43897 1013 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 ECEL1O95672 775 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 ITGB3P05106 788 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 KRT19P08727 400 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 PAEPP09466 180 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 DNAJB2P25686 324 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 RAD23BP54727 409 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 PLTPP55058 493 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 FAM189BP81408 668 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 LLGL1Q15334 1064 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 KCTD16Q68DU8 428 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
PKP4-206ENST00000452162 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms