RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 TAS1R2Q8TE23 839 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ATOH1Q92858 354 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 TRMT2BQ96GJ1 504 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ZFYVE19Q96K21 471 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 GCNAQ96QF7 691 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 B3GNT5Q9BYG0 378 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF518BQ9C0D4 1074 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 LTB4R2Q9NPC1 389 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 CCL26Q9Y258 94 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 MYO15AQ9UKN7 3530 aa13.17□□□□□ -0.3
CSNK1E-211ENST00000451964 F8VP50 259 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 CHADO15335 359 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 SMC2O95347 1197 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 BMP6P22004 513 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 TARSP26639 723 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 GRIK1P39086 918 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 ASPAP45381 313 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 ENPEPQ07075 957 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 UBXN2BQ14CS0 331 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 ELOA2Q8IYF1 753 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 B3GALNT2Q8NCR0 500 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 TAF4BQ92750 862 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 USP13Q92995 863 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 CYP2S1Q96SQ9 504 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 HMGXB4Q9UGU5 601 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 F5P12259 2224 aa13.16□□□□□ -0.3
CSNK1E-211ENST00000451964 DPYSL4O14531 572 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 CETN3O15182 167 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 KRT13P13646 458 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 DDX6P26196 483 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 SOX9P48436 509 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 MRE11P49959 708 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 ORC1Q13415 861 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 ZNF852Q6ZMS4 543 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 CELF5Q8N6W0 485 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 TTC8Q8TAM2 541 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 MRPS31Q92665 395 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 SEMA4DQ92854 862 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 CLDN23Q96B33 292 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 OSBPL6Q9BZF3 934 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 PIAS3Q9Y6X2 628 aa13.15□□□□□ -0.3
CSNK1E-211ENST00000451964 TRIM49BA6NDI0 452 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 CLSTN1O94985 981 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 AVPR1AP37288 418 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 NDST1P52848 882 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 TNK2Q07912 1038 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 MAML2Q8IZL2 1156 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 CRYBG2Q8N1P7 616 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 CEP295NLQ96MC4 621 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 KCNK16Q96T55 309 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 NELL2Q99435 816 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 BCO2Q9BYV7 579 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
CSNK1E-211ENST00000451964 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 C2orf78A6NCI8 922 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 TRIM66O15016 1216 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 P4HA1P13674 534 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 CCNE1P24864 410 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 ANXA13P27216 316 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 GTF2H1P32780 548 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 FKBP3Q00688 224 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
CSNK1E-211ENST00000451964 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms