RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 TRIM31Q9BZY9 425 aa9.05□□□□□ -0.96
DDB1-203ENST00000451943 UPF3AQ9H1J1 476 aaKnown RBP9.05□□□□□ -0.96
DDB1-203ENST00000451943 EPB41L4BQ9H329 900 aa9.05□□□□□ -0.96
DDB1-203ENST00000451943 HMX1Q9NP08 348 aaPredicted RBP9.05□□□□□ -0.96
DDB1-203ENST00000451943 GDAP2Q9NXN4 497 aa9.05□□□□□ -0.96
DDB1-203ENST00000451943 DRG1Q9Y295 367 aaKnown RBP9.05□□□□□ -0.96
DDB1-203ENST00000451943 USTQ9Y2C2 406 aa9.05□□□□□ -0.96
DDB1-203ENST00000451943 NR2E3Q9Y5X4 410 aa9.05□□□□□ -0.96
DDB1-203ENST00000451943 ALPK3Q96L96 1907 aa9.05□□□□□ -0.96
DDB1-203ENST00000451943 DNAH12Q6ZR08 3092 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 hCG_1818297A0A087WSY0 165 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 GOLGA6L10A6NI86 522 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 C3orf70A6NLC5 250 aaPredicted RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 M0QYV0 167 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 TP73O15350 636 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 RECQL4O94761 1208 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 ERBB2P04626 1255 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 PFKMP08237 780 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 MYZAPP0CAP1 466 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 PSMA2P25787 234 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 PCK1P35558 622 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 ACTN2P35609 894 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 PNPLA4P41247 253 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CDKN2BP42772 138 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 TMEM62Q0P6H9 643 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CALCOCO2Q13137 446 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 PPP1R7Q15435 360 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 HADHQ16836 314 aaKnown RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 TFDP3Q5H9I0 405 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 DAB2IPQ5VWQ8 1189 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 C9orf57Q5W0N0 161 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 MFSD7Q6UXD7 560 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 TRMT10CQ7L0Y3 403 aaKnown RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 NECAB2Q7Z6G3 386 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 ANKS1BQ7Z6G8 1248 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 RPAINQ86UA6 219 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CCDC50Q8IVM0 306 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CRYBG2Q8N1P7 616 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 TMEM130Q8N3G9 435 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 ARFGAP1Q8N6T3 406 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CCDC89Q8N998 374 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CMASQ8NFW8 434 aaPredicted RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 JOSD2Q8TAC2 188 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CCHCR1Q8TD31 782 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 IPO4Q8TEX9 1081 aaKnown RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 DIS3LQ8TF46 1054 aaKnown RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 UBLCP1Q8WVY7 318 aaPredicted RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 TMEM40Q8WWA1 233 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 NKD2Q969F2 451 aaPredicted RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 SNF8Q96H20 258 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 NCAPGQ9BPX3 1015 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 FOXP3Q9BZS1 431 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 CYLDQ9NQC7 956 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 TSPAN16Q9UKR8 245 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 OGDHLQ9ULD0 1010 aa9.04□□□□□ -0.96
DDB1-203ENST00000451943 R3HDM2Q9Y2K5 976 aaKnown RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
DDB1-203ENST00000451943 A0A0C4DFX4 3053 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 SMIM28A0A1B0GU29 152 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 SRRM3A6NNA2 597 aaPredicted RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 DPYSL4O14531 572 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 NDC80O14777 642 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 LIASO43766 372 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 LRCH4O75427 683 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 ENDOD1O94919 500 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 KRT1P04264 644 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 CYBAP13498 195 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 PRKAR2AP13861 404 aaKnown RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 TCF4P15884 667 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 KLRC2P26717 231 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 LRPAP1P30533 357 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 SCNN1AP37088 669 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 SSR1P43307 286 aaKnown RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 RPL34P49207 117 aaKnown RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 ZNF143P52747 638 aaPredicted RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 SNX16P57768 344 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 IRX5P78411 483 aaPredicted RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 BEX3Q00994 111 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 CACNB2Q08289 660 aaPredicted RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 OASLQ15646 514 aaKnown RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 ATP13A4Q4VNC1 1196 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 FBXO47Q5MNV8 452 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 LHX8Q68G74 356 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 CEP128Q6ZU80 1094 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 ARCQ7LC44 396 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 TMEM110Q86TL2 294 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 HOOK3Q86VS8 718 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 ZDHHC17Q8IUH5 632 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 RELL1Q8IUW5 271 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 ARFGAP2Q8N6H7 521 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 C7orf31Q8N865 590 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 TRPV1Q8NER1 839 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 SLC35F5Q8WV83 523 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 ATG4AQ8WYN0 398 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 RAPGEF5Q92565 580 aa9.03□□□□□ -0.96
DDB1-203ENST00000451943 RNF25Q96BH1 459 aaPredicted RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 LENG1Q96BZ8 264 aaPredicted RBP9.03□□□□□ -0.96
DDB1-203ENST00000451943 ZNF560Q96MR9 790 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms