RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 KIF9Q9HAQ2 790 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 GTSE1Q9NYZ3 720 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 PCDHGA2Q9Y5H1 932 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 KIF26AQ9ULI4 1882 aaPredicted RBP23.11■■□□□ 1.29
C9orf3-208ENST00000451893 MYBPHLA2RUH7 354 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 SPECC1L-ADORA2AF8WAN1 911 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 GABRDO14764 452 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 HCRTO43612 131 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 WEE1P30291 646 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 MLLT6P55198 1093 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-208ENST00000451893 PSMD2Q13200 908 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 BMT2Q1RMZ1 405 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 WDR72Q3MJ13 1102 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 CFAP221Q4G0U5 840 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 TXNDC8Q6A555 127 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 TSSK4Q6SA08 328 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 RALGPS2Q86X27 583 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-208ENST00000451893 SMARCE1Q969G3 411 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 MYLPFQ96A32 169 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 TDP1Q9NUW8 608 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 ZSCAN32Q9NX65 697 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 NCDNQ9UBB6 729 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 NXF1Q9UBU9 619 aaKnown RBP23.1■■□□□ 1.29
C9orf3-208ENST00000451893 PCDHA5Q9Y5H7 936 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 OBSL1O75147 1896 aa23.1■■□□□ 1.29
C9orf3-208ENST00000451893 KIF20AO95235 890 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 F11P03951 625 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 CKMP06732 381 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 HMGA1P17096 107 aaKnown RBP23.09■■□□□ 1.29
C9orf3-208ENST00000451893 WARSP23381 471 aaKnown RBP23.09■■□□□ 1.29
C9orf3-208ENST00000451893 GNL1P36915 607 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-208ENST00000451893 NRLP54845 237 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 EHHADHQ08426 723 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 PNOCQ13519 176 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 KCNB1Q14721 858 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 ITPRIPL2Q3MIP1 535 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 CT47A1Q5JQC4 288 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-208ENST00000451893 SCARA3Q6AZY7 606 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 MAML2Q8IZL2 1156 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-208ENST00000451893 EHD2Q9NZN4 543 aa23.09■■□□□ 1.29
C9orf3-208ENST00000451893 TRAV19A0A0A6YYK7 116 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 ARNTLO00327 626 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 TRIM66O15016 1216 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 ATP2C2O75185 946 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 BDNFP23560 247 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 LMO2P25791 158 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 CTHP32929 405 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 AMPD2Q01433 879 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 PON2Q15165 354 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 KMT5BQ4FZB7 885 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 MDH1BQ5I0G3 518 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 DGKKQ5KSL6 1271 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 KBTBD7Q8WVZ9 684 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 EXOC4Q96A65 974 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 FAM126AQ9BYI3 521 aaPredicted RBP23.08■■□□□ 1.29
C9orf3-208ENST00000451893 GKN1Q9NS71 199 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 RAB23Q9ULC3 237 aa23.08■■□□□ 1.29
C9orf3-208ENST00000451893 RIF1Q5UIP0 2472 aaKnown RBP23.08■■□□□ 1.29
C9orf3-208ENST00000451893 USP34Q70CQ2 3546 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 SOBPA7XYQ1 873 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 A8MXQ7 604 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 NOL4O94818 638 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 USP17L7P0C7H9 530 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 ATICP31939 592 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 MAGEA11P43364 429 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 PDE6CP51160 858 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 AP3M2P53677 418 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 TNK2Q07912 1038 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 DPYDQ12882 1025 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 CCDC142Q17RM4 750 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 ANO6Q4KMQ2 910 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 VSTM1Q6UX27 236 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 MON1AQ86VX9 555 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 C12orf56Q8IXR9 622 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 RUBCNQ92622 972 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 TRMT2BQ96GJ1 504 aaKnown RBP23.07■■□□□ 1.28
C9orf3-208ENST00000451893 BPIFA3Q9BQP9 254 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 PRMT8Q9NR22 394 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-208ENST00000451893 RMND1Q9NWS8 449 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 FRMD4BQ9Y2L6 1034 aa23.07■■□□□ 1.28
C9orf3-208ENST00000451893 CALUO43852 315 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-208ENST00000451893 CST3P01034 146 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-208ENST00000451893 CHRNB1P11230 501 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 CXCL12P48061 93 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 ZNF699Q32M78 642 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 CEP135Q66GS9 1140 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 FAM171BQ6P995 826 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 ANP32BQ92688 251 aaKnown RBP23.06■■□□□ 1.28
C9orf3-208ENST00000451893 USP13Q92995 863 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-208ENST00000451893 LRRC3BQ96PB8 259 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 PKMYT1Q99640 499 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 MRPL45Q9BRJ2 306 aaKnown RBP23.06■■□□□ 1.28
C9orf3-208ENST00000451893 RBM12Q9NTZ6 932 aaKnown RBP23.06■■□□□ 1.28
C9orf3-208ENST00000451893 DACH1Q9UI36 760 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 CCL26Q9Y258 94 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 ATP8B3O60423 1300 aa23.06■■□□□ 1.28
C9orf3-208ENST00000451893 TACC1O75410 805 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 ABL1P00519 1130 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 P4HA1P13674 534 aa23.05■■□□□ 1.28
C9orf3-208ENST00000451893 TRIM21P19474 475 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms