RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ADAM22Q9P0K1 906 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 AGAP1Q9UPQ3 857 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 CDY2AQ9Y6F7 541 aa6.97□□□□□ -1.29
USP46-202ENST00000451218 GBF1Q92538 1859 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 C17orf102A2RUQ5 167 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 KRIT1O00522 736 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 ATP2C2O75185 946 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 KRT14P02533 472 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 ASGR1P07306 291 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 RALAP11233 206 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 SLC1A1P43005 524 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 LILRA4P59901 499 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 PITX1P78337 314 aaPredicted RBP6.96□□□□□ -1.29
USP46-202ENST00000451218 GAD2Q05329 585 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 PTK6Q13882 451 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 KCNA10Q16322 511 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 UPP1Q16831 310 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 WDR44Q5JSH3 913 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 FBXO47Q5MNV8 452 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 USP37Q86T82 979 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 NME8Q8N427 588 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 EMC1Q8N766 993 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 ANKRD36BP1Q96IX9 119 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 PWWP2AQ96N64 755 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 B3GNT5Q9BYG0 378 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 DNAI2Q9GZS0 605 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 ZFYVE28Q9HCC9 887 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 TSPAN16Q9UKR8 245 aa6.96□□□□□ -1.29
USP46-202ENST00000451218 E5RJQ4 531 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 LIASO43766 372 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 NRLP54845 237 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 HDAC4P56524 1084 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 NOTUMQ6P988 496 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 ARCQ7LC44 396 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 FUKQ8N0W3 1084 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 PQLC3Q8N755 202 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 EXD1Q8NHP7 514 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 ZSCAN18Q8TBC5 510 aaPredicted RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 FBXO25Q8TCJ0 367 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 SCN8AQ9UQD0 1980 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 ZNF106Q9H2Y7 1883 aaKnown RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 WARSP23381 471 aaKnown RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 FNTAP49354 379 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 CDK7P50613 346 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 ATXN1P54253 815 aaKnown RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 BPIFB4P59827 614 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 IFI16Q16666 785 aaKnown RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 CA9Q16790 459 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 POLNQ7Z5Q5 900 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 RELL1Q8IUW5 271 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 FAM118BQ9BPY3 351 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 PARVAQ9NVD7 372 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 KLK14Q9P0G3 267 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 SLC12A6Q9UHW9 1150 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 HAX1O00165 279 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 RABGGTBP53611 331 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 TLCD1Q96CP7 247 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 KIF12Q96FN5 646 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 ZNF419Q96HQ0 510 aaPredicted RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 NXF1Q9UBU9 619 aaKnown RBP6.96□□□□□ -1.3
USP46-202ENST00000451218 ST3GAL5Q9UNP4 418 aa6.96□□□□□ -1.3
USP46-202ENST00000451218 SHROOM3Q8TF72 1996 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 TLR3O15455 904 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 TUBBP07437 444 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 KRT10P13645 584 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 CCDC130P13994 396 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 PECAM1P16284 738 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 NSFP46459 744 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 DMTNQ08495 405 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 KYAT1Q16773 422 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 OR2W6PQ8NHA6 318 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 LPPQ93052 612 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 CCDC102AQ96A19 550 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 LUC7LQ9NQ29 371 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 TMLHEQ9NVH6 421 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 ARL5CA6NH57 179 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 TNPO2O14787 897 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 MYL3P08590 195 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 NUDT17P0C025 328 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 RWDD2BP57060 319 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 DHX34Q14147 1143 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 HIBCHQ6NVY1 386 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 CCDC137Q6PK04 289 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 PLD5Q8N7P1 536 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 UBA3Q8TBC4 463 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 C1orf54Q8WWF1 131 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 PRM3Q9NNZ6 103 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 METTL5Q9NRN9 209 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 COL4A3Q01955 1670 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 TMEM110-MUSTN1A8MSY1 372 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 TRUB2O95900 331 aaKnown RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 CD4P01730 458 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 VDRP11473 427 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 ETS1P14921 441 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 SREBF2Q12772 1141 aa6.95□□□□□ -1.3
USP46-202ENST00000451218 SLC10A2Q12908 348 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 ZNF268Q14587 947 aaPredicted RBP6.95□□□□□ -1.3
USP46-202ENST00000451218 LLGL1Q15334 1064 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms