RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EXOSC10Q01780 885 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 PTH1RQ03431 593 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MAPK7Q13164 816 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TOB2Q14106 344 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 QPRTQ15274 297 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF174Q15697 407 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PKN2Q16513 984 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 MEA1Q16626 185 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 KNOP1Q1ED39 458 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 KRT24Q2M2I5 525 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TBC1D25Q3MII6 688 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 METTL24Q5JXM2 366 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DEPDC1Q5TB30 811 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CDKAL1Q5VV42 579 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ALKBH5Q6P6C2 394 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 KYAT3Q6YP21 454 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 TRIM72Q6ZMU5 477 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C4orf50Q6ZRC1 276 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 AADATQ8N5Z0 425 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 USHBP1Q8N6Y0 703 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 AMER2Q8N7J2 671 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ANKRD53Q8N9V6 530 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 OR5T2Q8NGG2 359 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CYGBQ8WWM9 190 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 STAMQ92783 540 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PROX1Q92786 737 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TTC17Q96AE7 1141 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PLEKHA8Q96JA3 519 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 AIFM3Q96NN9 605 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MNTQ99583 582 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZBTB18Q99592 522 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 OXCT2Q9BYC2 517 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 S100A14Q9HCY8 104 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VTI1BQ9UEU0 232 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.29□□□□□ -2.04
USP53-202ENST00000450251 SNX24Q9Y343 169 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 A0A0J9YVX5 310 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FAM47E-STBD1D6RA91 191 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 INO80B-WBP1J3KQ70 363 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SGK1O00141 431 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CHL1O00533 1208 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PRPF4O43172 522 aaKnown RBP eCLIP2.29□□□□□ -2.04
USP53-202ENST00000450251 RIPK2O43353 540 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 EFCAB14O75071 495 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 IL18RAPO95256 599 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 BMP10O95393 424 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FYNP06241 537 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CPA1P15085 419 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ATF6P18850 670 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FECHP22830 423 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PKLRP30613 574 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MAPK4P31152 587 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PRKAR1BP31321 381 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RRM2P31350 389 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 HALP42357 657 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 LIFRP42702 1097 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SLC18A1P54219 525 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VCPP55072 806 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 RPL10AP62906 217 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 KCNJ2P63252 427 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VAC14Q08AM6 782 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NIPAL4Q0D2K0 466 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DPYDQ12882 1025 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FAPQ12884 760 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 COX10Q12887 443 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CSTF3Q12996 717 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 BFSP2Q13515 415 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF181Q2M3W8 571 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 HSD17B12Q53GQ0 312 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ALFQ53S48 1182 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DGKKQ5KSL6 1271 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C11orf63Q6NUN7 778 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 KLHDC10Q6PID8 442 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ERO1BQ86YB8 467 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RAB43Q86YS6 212 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ASCC1Q8N9N2 400 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 C19orf18Q8NEA5 215 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TRUB1Q8WWH5 349 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 SPIRE2Q8WWL2 714 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VPS39Q96JC1 886 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PLEKHF1Q96S99 279 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 APOL2Q9BQE5 337 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TBC1D10AQ9BXI6 508 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VPS33BQ9H267 617 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 HIPK3Q9H422 1215 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RETREG1Q9H6L5 497 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ACAD9Q9H845 621 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SUGCTQ9HAC7 445 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CYLDQ9NQC7 956 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 LRP2BPQ9P2M1 347 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 HEY2Q9UBP5 337 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ITGA11Q9UKX5 1188 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF510Q9Y2H8 683 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PTPN22Q9Y2R2 807 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 STON1Q9Y6Q2 735 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CPDO75976 1380 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CEMIPQ8WUJ3 1361 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CLUHO75153 1309 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FAM237AA0A1B0GTK4 181 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF33A8MVX0 844 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms