RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SMARCD1Q96GM5 515 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 CALR3Q96L12 384 aaKnown RBP20.37■□□□□ 0.85
RPS28-202ENST00000449223 HSFY1Q96LI6 401 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 SLC4A5Q9BY07 1137 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 UBXN6Q9BZV1 441 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 UBE2OQ9C0C9 1292 aaKnown RBP20.37■□□□□ 0.85
RPS28-202ENST00000449223 ABCB6Q9NP58 842 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 LZTFL1Q9NQ48 299 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 TMLHEQ9NVH6 421 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 ADAM22Q9P0K1 906 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 STRIP2Q9ULQ0 834 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 DUSP10Q9Y6W6 482 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 FAM200BP0CF97 657 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 ADORA2BP29275 332 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 SLC8A3P57103 927 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 PDE4CQ08493 712 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 GPR17Q13304 367 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 CLEC20AQ6ZU45 233 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 TMEM110Q86TL2 294 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 ERICH1Q86X53 443 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 RHOT2Q8IXI1 618 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 UBA3Q8TBC4 463 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 CPXM1Q96SM3 734 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 MIS12Q9H081 205 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 PNPLA8Q9NP80 782 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 MYO1AQ9UBC5 1043 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 TRIM10Q9UDY6 481 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 H0YGN5 161 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 CLDN5O00501 218 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 MTA2O94776 668 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 ABCB4P21439 1286 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 PSMD5Q16401 504 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 FAM109BQ6ICB4 259 aaPredicted RBP20.36■□□□□ 0.85
RPS28-202ENST00000449223 PLEKHA7Q6IQ23 1121 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 PMF1Q6P1K2 205 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 RSPO2Q6UXX9 243 aaPredicted RBP20.36■□□□□ 0.85
RPS28-202ENST00000449223 MMS22LQ6ZRQ5 1243 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 KLHL23Q8NBE8 558 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 C2orf15Q8WU43 125 aaKnown RBP20.36■□□□□ 0.85
RPS28-202ENST00000449223 RIN2Q8WYP3 895 aaPredicted RBP20.36■□□□□ 0.85
RPS28-202ENST00000449223 KCTD13Q8WZ19 329 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 ARHGEF26Q96DR7 871 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 SAMD11Q96NU1 681 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 C11orf70Q9BRQ4 267 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 ZBP1Q9H171 429 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 KRT82Q9NSB4 513 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 UVRAGQ9P2Y5 699 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 SALL4Q9UJQ4 1053 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 CHD9Q3L8U1 2897 aa20.36■□□□□ 0.85
RPS28-202ENST00000449223 TCRBV5S1A1TA0A578 114 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 LILRB3O75022 631 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 TUBB4AP04350 444 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 URODP06132 367 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 RB1P06400 928 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 MAGEA11P43364 429 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 RABGGTBP53611 331 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 SNX16P57768 344 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 UBE3AQ05086 875 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 SLC39A12Q504Y0 691 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 KIAA1841Q6NSI8 718 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 VPS52Q8N1B4 723 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 FBXO22Q8NEZ5 403 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 ZNF653Q96CK0 615 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.35■□□□□ 0.852e-11■■□□□ 13.6
RPS28-202ENST00000449223 FNIP2Q9P278 1114 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 WDR35Q9P2L0 1181 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 GUCA1BQ9UMX6 200 aa20.35■□□□□ 0.85
RPS28-202ENST00000449223 TULP2O00295 520 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 CTSAP10619 480 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 RRM1P23921 792 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 ACADSBP45954 432 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 CREMQ03060 361 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 ZNF268Q14587 947 aaPredicted RBP20.34■□□□□ 0.85
RPS28-202ENST00000449223 LIN9Q5TKA1 542 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 PRSS55Q6UWB4 352 aaPredicted RBP20.34■□□□□ 0.85
RPS28-202ENST00000449223 VSTM1Q6UX27 236 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 IPO4Q8TEX9 1081 aaKnown RBP20.34■□□□□ 0.85
RPS28-202ENST00000449223 C18orf8Q96DM3 657 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 SMOQ99835 787 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 CLSTN3Q9BQT9 956 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 MED10Q9BTT4 135 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 RXFP1Q9HBX9 757 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 DMAP1Q9NPF5 467 aaPredicted RBP20.34■□□□□ 0.85
RPS28-202ENST00000449223 TMEM30AQ9NV96 361 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 CNOT8Q9UFF9 292 aaKnown RBP20.34■□□□□ 0.85
RPS28-202ENST00000449223 SSX2IPQ9Y2D8 614 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 IRAK3Q9Y616 596 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 SCINQ9Y6U3 715 aa20.34■□□□□ 0.85
RPS28-202ENST00000449223 GRXCR1A8MXD5 290 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 AP1G2O75843 785 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 BEST1O76090 585 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 OR4Q2P0C623 313 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 CTNNB1P35222 781 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 RAB41Q5JT25 222 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 PIGZQ86VD9 579 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 ZDHHC17Q8IUH5 632 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 SPATA2LQ8IUW3 424 aaPredicted RBP20.33■□□□□ 0.85
RPS28-202ENST00000449223 C3orf20Q8ND61 904 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 ZMIZ2Q8NF64 920 aa20.33■□□□□ 0.85
RPS28-202ENST00000449223 SLC35G2Q8TBE7 412 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms