RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CILPO75339 1184 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 CD48P09326 243 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 RPL22P35268 128 aaKnown RBP17.77■□□□□ 0.44
TOM1-210ENST00000449058 GAD2Q05329 585 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 PTPN11Q06124 597 aaPredicted RBP17.77■□□□□ 0.44
TOM1-210ENST00000449058 TMEM132AQ24JP5 1023 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 ZBTB10Q96DT7 871 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 PITPNM3Q9BZ71 974 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 SMYD3Q9H7B4 428 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 C10orf88Q9H8K7 445 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 PSMC3IPQ9P2W1 217 aaPredicted RBP17.77■□□□□ 0.44
TOM1-210ENST00000449058 HMGXB4Q9UGU5 601 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 RABGEF1Q9UJ41 708 aa17.77■□□□□ 0.44
TOM1-210ENST00000449058 LACTBL1A8MY62 500 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 E7ESA3 106 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 BANF1O75531 89 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 ATP6V1G2O95670 118 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 KRT15P19012 456 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 ORC1Q13415 861 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 RIPK1Q13546 671 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 SPARCL1Q14515 664 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 ACAP1Q15027 740 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 CAPN12Q6ZSI9 719 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 TBC1D1Q86TI0 1168 aaPredicted RBP17.76■□□□□ 0.43
TOM1-210ENST00000449058 ANKMY2Q8IV38 441 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 SMC6Q96SB8 1091 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 VRTNQ9H8Y1 702 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 TXNRD2Q9NNW7 524 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 KLHL14Q9P2G3 628 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.76■□□□□ 0.436e-6■■■■■ 55.1
TOM1-210ENST00000449058 STARD13Q9Y3M8 1113 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 GOLGA8MH3BSY2 632 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 TYROBPO43914 113 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 MICAL2O94851 1124 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 C22orf31O95567 290 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 ARL4CP56559 192 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 GEMIN4P57678 1058 aaKnown RBP17.76■□□□□ 0.43
TOM1-210ENST00000449058 CCDC15Q0P6D6 951 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 FAM187BQ17R55 369 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 MSS51Q4VC12 460 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 FNBP1LQ5T0N5 605 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 JADE1Q6IE81 842 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 ECHDC2Q86YB7 292 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 FBXO16Q8IX29 292 aaPredicted RBP17.76■□□□□ 0.43
TOM1-210ENST00000449058 TMEM130Q8N3G9 435 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 COPS5Q92905 334 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 WDR83Q9BRX9 315 aaKnown RBP17.76■□□□□ 0.43
TOM1-210ENST00000449058 SYNCQ9H7C4 482 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
TOM1-210ENST00000449058 SSU72Q9NP77 194 aaKnown RBP17.76■□□□□ 0.43
TOM1-210ENST00000449058 PRMT7Q9NVM4 692 aaPredicted RBP17.76■□□□□ 0.43
TOM1-210ENST00000449058 APOC4-APOC2K7ER74 178 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 APOC2P02655 101 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 ITGB3P05106 788 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 STAG3L1P0CL83 205 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 NQO1P15559 274 aaKnown RBP17.75■□□□□ 0.43
TOM1-210ENST00000449058 MIPP30301 263 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 ATICP31939 592 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 PDK4Q16654 411 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 UNC45BQ8IWX7 931 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 PAIP2Q9BPZ3 127 aaKnown RBP17.75■□□□□ 0.43
TOM1-210ENST00000449058 DHRS4Q9BTZ2 278 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 CYP3A43Q9HB55 503 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 RBPJLQ9UBG7 517 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 GRID1Q9ULK0 1009 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 SMAPO00193 183 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 TRUB2O95900 331 aaKnown RBP17.75■□□□□ 0.43
TOM1-210ENST00000449058 MCF2P10911 925 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 RPA3P35244 121 aaPredicted RBP17.75■□□□□ 0.43
TOM1-210ENST00000449058 GPD2P43304 727 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 AMHR2Q16671 573 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 PREPLQ4J6C6 727 aaPredicted RBP17.75■□□□□ 0.43
TOM1-210ENST00000449058 ZC3H12AQ5D1E8 599 aaKnown RBP17.75■□□□□ 0.43
TOM1-210ENST00000449058 WLSQ5T9L3 541 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 FAM47EQ6ZV65 393 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 C4orf33Q8N1A6 199 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 ANKLE1Q8NAG6 615 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 ATP11CQ8NB49 1132 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 KCTD6Q8NC69 237 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 PYROXD1Q8WU10 500 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 OTUD5Q96G74 571 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 PCSK1NQ9UHG2 260 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 PNMA3Q9UL41 463 aa17.75■□□□□ 0.43
TOM1-210ENST00000449058 A0A1W2PPM1 405 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 PHBP35232 272 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 RDXP35241 583 aaKnown RBP17.74■□□□□ 0.43
TOM1-210ENST00000449058 KCNJ2P63252 427 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 TAF5Q15542 800 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 Q3C1V9 767 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 MAK16Q9BXY0 300 aaKnown RBP17.74■□□□□ 0.43
TOM1-210ENST00000449058 RNPEPQ9H4A4 650 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 ACSS3Q9H6R3 686 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 ELP3Q9H9T3 547 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 NOD2Q9HC29 1040 aa17.74■□□□□ 0.43
TOM1-210ENST00000449058 USP18Q9UMW8 372 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms