RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GTPBP4Q9BZE4 634 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 TMEM206Q9H813 350 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 IL21Q9HBE4 155 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 PCDHB5Q9Y5E4 795 aa14.73□□□□□ -0.05
PDLIM2-213ENST00000448520 DENND4CQ5VZ89 1909 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 ATG2BQ96BY7 2078 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 HRO43593 1189 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 FOXD2O60548 495 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 NR3C1P04150 777 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 CSH1P0DML2 217 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 CSH2P0DML3 217 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 ATF6P18850 670 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 SOX9P48436 509 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 CCINQ13939 588 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 TXNDC11Q6PKC3 985 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 PRR23BQ6ZRT6 265 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 CMTM8Q8IZV2 173 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 AOPEPQ8N6M6 819 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 GIPC2Q8TF65 315 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 ZFYVE19Q96K21 471 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 ACBD6Q9BR61 282 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 CBX8Q9HC52 389 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 GKN1Q9NS71 199 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 RBM12Q9NTZ6 932 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 ABI2Q9NYB9 513 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 DACH1Q9UI36 760 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 RWDD2AQ9UIY3 292 aa14.72□□□□□ -0.05
PDLIM2-213ENST00000448520 NCOR2Q9Y618 2525 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 CHURC1-FNTBB4DL54 471 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 K7ESF4 209 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 PDXKO00764 312 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 KIF20AO95235 890 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 F11P03951 625 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 GARTP22102 1010 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 AVPR1AP37288 418 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 FNTBP49356 437 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 CASP4P49662 377 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 ZNF165P49910 485 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 CYP4F8P98187 520 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 SPEM2Q0P670 501 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 PON2Q15165 354 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 HSP90AA4PQ58FG1 418 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 LUZP1Q86V48 1076 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 DHX40Q8IX18 779 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 EFCAB13Q8IY85 973 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 TMEM86AQ8N2M4 240 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 RNF214Q8ND24 703 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 SPATA18Q8TC71 538 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 EXOC4Q96A65 974 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 FAM83CQ9BQN1 747 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 FAM213AQ9BRX8 229 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 KIF9Q9HAQ2 790 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 PARD6AQ9NPB6 346 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 UXTQ9UBK9 157 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 TRAF3IP3Q9Y228 551 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 SPAG17Q6Q759 2223 aa14.71□□□□□ -0.05
PDLIM2-213ENST00000448520 CCDC163A0A0D9SF12 145 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 CALUO43852 315 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 HUS1O60921 280 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 ATG13O75143 517 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 PRAMEF12O95522 483 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 HMGA1P17096 107 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 NR2F2P24468 414 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 ERCC5P28715 1186 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 PPP1R2P41236 205 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 RPL10AP62906 217 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 TFAMQ00059 246 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 MYL7Q01449 175 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 TNK2Q07912 1038 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 GRSF1Q12849 480 aaKnown RBP eCLIP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 BFSP1Q12934 665 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 RUNX3Q13761 415 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 NCAPHQ15003 741 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 IQCB1Q15051 598 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 LPAL2Q16609 132 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 MON1AQ86VX9 555 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 WDR5BQ86VZ2 330 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 BRSK2Q8IWQ3 736 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 LRRC52Q8N7C0 313 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 MAB21L3Q8N8X9 362 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 TTC8Q8TAM2 541 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 NETO1Q8TDF5 533 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 MRPS31Q92665 395 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 TSG101Q99816 390 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 TDP1Q9NUW8 608 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 HSPBP1Q9NZL4 362 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 AGAP1Q9UPQ3 857 aa14.7□□□□□ -0.06
PDLIM2-213ENST00000448520 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 TRDMT1O14717 391 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 LHX1P48742 406 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 WNT7BP56706 349 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 RBP5P82980 135 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 LRRC63Q05C16 580 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 ZNF268Q14587 947 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 CSRP2Q16527 193 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 EDRF1Q3B7T1 1238 aa14.69□□□□□ -0.06
PDLIM2-213ENST00000448520 TMEM196Q5HYL7 178 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms