RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 SLCO2A1Q92959 643 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 TMEM176AQ96HP8 235 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 FAM129AQ9BZQ8 928 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 NXF3Q9H4D5 531 aaKnown RBP15.57■□□□□ 0.08
SF1-211ENST00000448404 CPA4Q9UI42 421 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 DNM1LO00429 736 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 EIF4BP23588 611 aaKnown RBP15.57■□□□□ 0.08
SF1-211ENST00000448404 SMAD1Q15797 465 aaKnown RBP15.57■□□□□ 0.08
SF1-211ENST00000448404 CNGA2Q16280 664 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 TFDP3Q5H9I0 405 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 OR6B2Q6IFH4 312 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 RCOR2Q8IZ40 523 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 CABS1Q96KC9 395 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 MPHOSPH6Q99547 160 aaKnown RBP15.57■□□□□ 0.08
SF1-211ENST00000448404 KATNBL1Q9H079 304 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 DPP3Q9NY33 737 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 TSPAN16Q9UKR8 245 aa15.57■□□□□ 0.08
SF1-211ENST00000448404 HNRNPH1P31943 449 aaKnown RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 MAP2K2P36507 400 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 ZC3H12AQ5D1E8 599 aaKnown RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 SWT1Q5T5J6 900 aaKnown RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 C1orf228Q6PIY5 440 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 C4orf33Q8N1A6 199 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 DYDC1Q8WWB3 177 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 CHMP6Q96FZ7 201 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 ZNF317Q96PQ6 595 aaPredicted RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 KLF6Q99612 283 aaPredicted RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 BCO2Q9BYV7 579 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 VPS37BQ9H9H4 285 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 PRMT7Q9NVM4 692 aaPredicted RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 ANK1P16157 1881 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 KAT6AQ92794 2004 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 TJP3O95049 919 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 SSTR1P30872 391 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 GPD2P43304 727 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 ENPEPQ07075 957 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 PPP1R26Q5T8A7 1209 aaPredicted RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 HIBCHQ6NVY1 386 aaPredicted RBP15.56■□□□□ 0.08
SF1-211ENST00000448404 PMF1Q6P1K2 205 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 FAM183BPQ6ZVS7 135 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 GPR142Q7Z601 462 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 RFX6Q8HWS3 928 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 CCDC89Q8N998 374 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 GRK7Q8WTQ7 553 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 TMEM40Q8WWA1 233 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 FGFR1OP2Q9NVK5 253 aa15.56■□□□□ 0.08
SF1-211ENST00000448404 ASB14A6NK59 587 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 AVILO75366 819 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 GABBR2O75899 941 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 KIAA0754O94854 1291 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 BRAFP15056 766 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 BEX3Q00994 111 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 LAMC2Q13753 1193 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 OASLQ15646 514 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 FNBP1LQ5T0N5 605 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 LDLRAD1Q5T700 205 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 ALLCQ8N6M5 410 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 KCTD6Q8NC69 237 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 ADPGKQ9BRR6 497 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 TRIM56Q9BRZ2 755 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.55■□□□□ 0.08
SF1-211ENST00000448404 PCDHGC3Q9UN70 934 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 TCP11X1B4DZS4 312 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 LSM8O95777 96 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 AGTP01019 485 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 AP3M2P53677 418 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 YWHAEP62258 255 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 PDIA2Q13087 525 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 CCL14Q16627 93 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 CA9Q16790 459 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 KCNV1Q6PIU1 500 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 OR6J1Q8NGC5 347 aa15.55■□□□□ 0.08
SF1-211ENST00000448404 RBM41Q96IZ5 413 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 WDR83Q9BRX9 315 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 NGRNQ9NPE2 291 aaKnown RBP15.55■□□□□ 0.08
SF1-211ENST00000448404 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.55■□□□□ 0.08
SF1-211ENST00000448404 SIGLEC16A6NMB1 481 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 PFKMP08237 780 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 GCAP28676 217 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 HOXA11P31270 313 aaPredicted RBP15.54■□□□□ 0.08
SF1-211ENST00000448404 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
SF1-211ENST00000448404 FAM47EQ6ZV65 393 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 RXFP2Q8WXD0 754 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 ACAP3Q96P50 834 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 GOLGA8RI6L899 631 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 KDELR1P24390 212 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 GSCP56915 257 aaPredicted RBP15.54■□□□□ 0.08
SF1-211ENST00000448404 PIGHQ14442 188 aaPredicted RBP15.54■□□□□ 0.08
SF1-211ENST00000448404 GOLGA7BQ2TAP0 167 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 TTC30AQ86WT1 665 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 LINC01465Q8N7H1 131 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 PPTC7Q8NI37 304 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 KCNN1Q92952 543 aa15.54■□□□□ 0.08
SF1-211ENST00000448404 DICER1Q9UPY3 1922 aaKnown RBP15.54■□□□□ 0.08
SF1-211ENST00000448404 A0A1W2PPM1 405 aa15.53■□□□□ 0.08
SF1-211ENST00000448404 MMP3P08254 477 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms