RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SLC25A41Q8N5S1 370 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TBC1D19Q8N5T2 526 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 SLC7A14Q8TBB6 771 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TFB1MQ8WVM0 346 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CCDC126Q96EE4 140 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 C17orf75Q9HAS0 396 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 MAP3K20Q9NYL2 800 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CLTCL1P53675 1640 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 MADDQ8WXG6 1647 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TIMM44O43615 452 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 WBP4O75554 376 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 SKAP2O75563 359 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ANXA9O76027 345 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 GLI1P08151 1106 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TFE3P19532 575 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 GRK2P25098 689 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 GNL1P36915 607 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 HMGCS2P54868 508 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 AQP5P55064 265 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 POU4F1Q01851 419 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CHRNB3Q05901 458 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 GRB10Q13322 594 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CUL2Q13617 745 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 GTF2H3Q13889 308 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 RASA2Q15283 850 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ATF7IP2Q5U623 682 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 IZUMO2Q6UXV1 221 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 DIS3LQ8TF46 1054 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 PAFAH2Q99487 392 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 THUMPD3Q9BV44 507 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 PACSIN1Q9BY11 444 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 PRMT7Q9NVM4 692 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ADGRA3Q8IWK6 1321 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TSPOAP1O95153 1857 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 SUPT7LO94864 414 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 DLGAP3O95886 979 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 SERPINB5P36952 375 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 MCL1Q07820 350 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 OASLQ15646 514 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CYP4A22Q5TCH4 519 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 SLC26A11Q86WA9 606 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TERB1Q8NA31 727 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 UBA3Q8TBC4 463 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TARS2Q9BW92 718 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 KLHL4Q9C0H6 718 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 DYRK4Q9NR20 520 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ARHGAP20Q9P2F6 1191 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 POLR1AO95602 1720 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 INO80Q9ULG1 1556 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 KRT87PA6NCN2 255 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 F8VZ95 297 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TOMM70O94826 608 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 RHOBTB1O94844 696 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 RALBP11234 206 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 MUTP22033 750 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TKFCQ3LXA3 575 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TFDP3Q5H9I0 405 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 IYDQ6PHW0 289 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 TADA1Q96BN2 335 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 ACSF2Q96CM8 615 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 MAML3Q96JK9 1138 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 BRD8Q9H0E9 1235 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 SELENONQ9NZV5 590 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 DDX20Q9UHI6 824 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CNOT7Q9UIV1 285 aaKnown RBP8.07□□□□□ -1.12
NEDD9-204ENST00000448183 VPS9D1Q9Y2B5 631 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 CDC42BPBQ9Y5S2 1711 aa8.07□□□□□ -1.12
NEDD9-204ENST00000448183 A0A0G2JLW4 131 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 CFAP99D6REC4 459 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 SLCO1B7G3V0H7 640 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 TM9SF1O15321 606 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 ENTPD3O75355 529 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 SGPL1O95470 568 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 IMPDH2P12268 514 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 CHRM3P20309 590 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 PCSK1P29120 753 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 MLH1P40692 756 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 SERPINB8P50452 374 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 PEX5P50542 639 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 CEP78Q5JTW2 689 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 WASHC2DQ5SRD0 308 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 ACBD5Q5T8D3 534 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-204ENST00000448183 SEL1L3Q68CR1 1132 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 IL31Q6EBC2 164 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 LUZP2Q86TE4 346 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 TMEM120AQ9BXJ8 343 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 PCDHB8Q9UN66 801 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 DNAJC16Q9Y2G8 782 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 RNF17Q9BXT8 1623 aaKnown RBP8.06□□□□□ -1.12
NEDD9-204ENST00000448183 USP31Q70CQ4 1352 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 SDR42E2A6NKP2 422 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 CYBBP04839 570 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 PGK2P07205 417 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 CNTFP26441 200 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 GOLGA7BQ2TAP0 167 aa8.06□□□□□ -1.12
NEDD9-204ENST00000448183 SGO1Q5FBB7 561 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms