RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 TMC7Q7Z402 723 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 ERICH1Q86X53 443 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 PHF13Q86YI8 300 aaPredicted RBP20.65■□□□□ 0.9
SGCE-207ENST00000447873 GPR65Q8IYL9 337 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 C17orf53Q8N3J3 647 aaPredicted RBP20.65■□□□□ 0.9
SGCE-207ENST00000447873 MSANTD4Q8NCY6 345 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 ADAM22Q9P0K1 906 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 CYTH4Q9UIA0 394 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 INTUQ9ULD6 942 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 TFR2Q9UP52 801 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 ANKRD62A6NC57 917 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 AP1G2O75843 785 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 BDNFP23560 247 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 ERVK-21P61565 698 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 UBE3AQ05086 875 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 SMARCB1Q12824 385 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 PDCLQ13371 301 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 CHRDL2Q6WN34 429 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 MMS22LQ6ZRQ5 1243 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 SPPL3Q8TCT6 385 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 SLC35F5Q8WV83 523 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 AUTS2Q8WXX7 1259 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 CTNNBL1Q8WYA6 563 aaPredicted RBP20.64■□□□□ 0.9
SGCE-207ENST00000447873 PGLYRP2Q96PD5 576 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 CLSTN3Q9BQT9 956 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 C11orf70Q9BRQ4 267 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 NKX2-4Q9H2Z4 354 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 SYNCQ9H7C4 482 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 ST7Q9NRC1 585 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.64■□□□□ 0.9
SGCE-207ENST00000447873 ABI2Q9NYB9 513 aaPredicted RBP20.64■□□□□ 0.9
SGCE-207ENST00000447873 PCDHB5Q9Y5E4 795 aa20.64■□□□□ 0.9
SGCE-207ENST00000447873 ADAM12O43184 909 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 MMP8P22894 467 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 CREMQ03060 361 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 MLLT1Q03111 559 aaPredicted RBP20.63■□□□□ 0.89
SGCE-207ENST00000447873 PTPN14Q15678 1187 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 ARHGAP29Q52LW3 1261 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 CLEC20AQ6ZU45 233 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 MCOLN2Q8IZK6 566 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 POF1BQ8WVV4 589 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 TRIM11Q96F44 468 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 FUBP3Q96I24 572 aaKnown RBP eCLIP20.63■□□□□ 0.89
SGCE-207ENST00000447873 VCPIP1Q96JH7 1222 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 PPP1R13BQ96KQ4 1090 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 TCF25Q9BQ70 676 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 RHOBTB2Q9BYZ6 727 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 LACRTQ9GZZ8 138 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 THAP2Q9H0W7 228 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 LZTFL1Q9NQ48 299 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 ENTPD7Q9NQZ7 604 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 KCND1Q9NSA2 647 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 CHD9Q3L8U1 2897 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 A0A0U1RQJ8 604 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 RCCD1A6NED2 376 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 USP27XA6NNY8 438 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 XPO1O14980 1071 aaKnown RBP20.63■□□□□ 0.89
SGCE-207ENST00000447873 BEST1O76090 585 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 TMEM253P0C7T8 217 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 CYP2F1P24903 491 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 MAP3K7CLP57077 242 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 GPC5P78333 572 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 ROR1Q01973 937 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 C1QBPQ07021 282 aaKnown RBP20.63■□□□□ 0.89
SGCE-207ENST00000447873 CFAP221Q4G0U5 840 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 PTPN20Q4JDL3 420 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 C2CD6Q53TS8 623 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 PPP2R2DQ66LE6 453 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 PMF1Q6P1K2 205 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 MON1BQ7L1V2 547 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 STK32AQ8WU08 396 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 C2orf15Q8WU43 125 aaKnown RBP20.63■□□□□ 0.89
SGCE-207ENST00000447873 ATRIPQ8WXE1 791 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 CPXM1Q96SM3 734 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 TSGA10Q9BZW7 698 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 SLC28A3Q9HAS3 691 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 TLR9Q9NR96 1032 aa20.63■□□□□ 0.89
SGCE-207ENST00000447873 WDR27A2RRH5 827 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 GOLGA6L9A6NEM1 432 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 TULP2O00295 520 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 PJA2O43164 708 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 KRT86O43790 486 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 LILRB3O75022 631 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 CXCL14O95715 111 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 CALB1P05937 261 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 MYBL1P10243 752 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 PLA2G4AP47712 749 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 RGS7P49802 495 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 SNX16P57768 344 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 ERVFC1P60507 584 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 LIN9Q5TKA1 542 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 RNF19BQ6ZMZ0 732 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 REXO1L1PQ8IX06 675 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 SPPL2BQ8TCT7 592 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 IPO4Q8TEX9 1081 aaKnown RBP20.62■□□□□ 0.89
SGCE-207ENST00000447873 ZNF653Q96CK0 615 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 KCNK16Q96T55 309 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 SMOQ99835 787 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 ABCB6Q9NP58 842 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms