RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 CCDC47Q96A33 483 aaKnown RBP20.07■□□□□ 0.8
COMMD1-204ENST00000445644 SLC22A12Q96S37 553 aa20.07■□□□□ 0.8
COMMD1-204ENST00000445644 NDRG2Q9UN36 371 aaKnown RBP20.07■□□□□ 0.8
COMMD1-204ENST00000445644 MAPK13O15264 365 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 TNK2Q07912 1038 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 MAPRE1Q15691 268 aaKnown RBP20.06■□□□□ 0.8
COMMD1-204ENST00000445644 SPOPLQ6IQ16 392 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 VSTM1Q6UX27 236 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 MON1AQ86VX9 555 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 YAF2Q8IY57 180 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 TTC8Q8TAM2 541 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 USP13Q92995 863 aaPredicted RBP20.06■□□□□ 0.8
COMMD1-204ENST00000445644 SPATA17Q96L03 361 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 B3GNT5Q9BYG0 378 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 BCO2Q9BYV7 579 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 GTSE1Q9NYZ3 720 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 FRMD4BQ9Y2L6 1034 aa20.06■□□□□ 0.8
COMMD1-204ENST00000445644 MYO16Q9Y6X6 1858 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 PIEZO1Q92508 2521 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 MYH10P35580 1976 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 KIAA1549LQ6ZVL6 1849 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 A8MXQ7 604 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 CLDN5O00501 218 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 DPYSL4O14531 572 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 KIF20AO95235 890 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 SP9P0CG40 484 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 TRIM49P0CI25 452 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 TRIM49CP0CI26 452 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 CCNE1P24864 410 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 DDX6P26196 483 aaKnown RBP eCLIP20.05■□□□□ 0.8
COMMD1-204ENST00000445644 RPS9P46781 194 aaKnown RBP20.05■□□□□ 0.8
COMMD1-204ENST00000445644 VAMP7P51809 220 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 PPP3CAQ08209 521 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 ARHGAP29Q52LW3 1261 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 ZNF667Q5HYK9 610 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 TXNDC11Q6PKC3 985 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 CELF5Q8N6W0 485 aaKnown RBP20.05■□□□□ 0.8
COMMD1-204ENST00000445644 B3GALNT2Q8NCR0 500 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 SPATA20Q8TB22 786 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 FAM3CQ92520 227 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 NELL2Q99435 816 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 ZNF518BQ9C0D4 1074 aa20.05■□□□□ 0.8
COMMD1-204ENST00000445644 UXTQ9UBK9 157 aaPredicted RBP20.05■□□□□ 0.8
COMMD1-204ENST00000445644 PRR23AA6NEV1 266 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 MAN2B1O00754 1011 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 IKBKBO14920 756 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 GFRA3O60609 400 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 ASS1P00966 412 aaKnown RBP20.04■□□□□ 0.8
COMMD1-204ENST00000445644 HLA-DRAP01903 254 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 GRIK1P39086 918 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 MLLT6P55198 1093 aaPredicted RBP20.04■□□□□ 0.8
COMMD1-204ENST00000445644 MCCD1P59942 119 aaPredicted RBP20.04■□□□□ 0.8
COMMD1-204ENST00000445644 FAM160A1Q05DH4 1040 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 PAQR9Q6ZVX9 377 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 FAM186BQ8IYM0 893 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 CSGALNACT1Q8TDX6 532 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 MRPS31Q92665 395 aaKnown RBP20.04■□□□□ 0.8
COMMD1-204ENST00000445644 CHFRQ96EP1 664 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 CYP2S1Q96SQ9 504 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 TDP1Q9NUW8 608 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 GCNT4Q9P109 453 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 HMGXB4Q9UGU5 601 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 ZMYM5Q9UJ78 669 aa20.04■□□□□ 0.8
COMMD1-204ENST00000445644 CFAP54Q96N23 3096 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 C2orf78A6NCI8 922 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 SOBPA7XYQ1 873 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 F8VP50 259 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 AVPR1AP37288 418 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 PRCPP42785 496 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 MAGEA9P43362 315 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 ASPAP45381 313 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 ADAM9Q13443 819 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 EEF2KMTQ96G04 330 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 C8orf48Q96LL4 319 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 FAM83CQ9BQN1 747 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 TTLL2Q9BWV7 592 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 APOBEC3GQ9HC16 384 aaKnown RBP20.03■□□□□ 0.8
COMMD1-204ENST00000445644 HPS4Q9NQG7 708 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■■■■■ 149.1
COMMD1-204ENST00000445644 SPATA6Q9NWH7 488 aaPredicted RBP20.03■□□□□ 0.8
COMMD1-204ENST00000445644 MRPS17Q9Y2R5 130 aaKnown RBP20.03■□□□□ 0.8
COMMD1-204ENST00000445644 R4GN57 208 aa20.03■□□□□ 0.8
COMMD1-204ENST00000445644 OTOL1A6NHN0 477 aaPredicted RBP20.02■□□□□ 0.8
COMMD1-204ENST00000445644 SPECC1L-ADORA2AF8WAN1 911 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 TRIM66O15016 1216 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 CHRNB1P11230 501 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 CTHP32929 405 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 PIK3CAP42336 1068 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 GCLMP48507 274 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 MTAPQ13126 283 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 ORC1Q13415 861 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 ZNF268Q14587 947 aaPredicted RBP20.02■□□□□ 0.8
COMMD1-204ENST00000445644 SGSM1Q2NKQ1 1148 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 EDRF1Q3B7T1 1238 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 TRIM68Q6AZZ1 485 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 DENND5BQ6ZUT9 1274 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 INTS8Q75QN2 995 aaKnown RBP20.02■□□□□ 0.8
COMMD1-204ENST00000445644 TAS1R2Q8TE23 839 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 CEP295NLQ96MC4 621 aa20.02■□□□□ 0.8
COMMD1-204ENST00000445644 TRPC7Q9HCX4 862 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms