RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PTPN11Q06124 597 aaPredicted RBP17.34■□□□□ 0.37
TCOF1-206ENST00000445265 SMAD1Q15797 465 aaKnown RBP17.34■□□□□ 0.37
TCOF1-206ENST00000445265 SAMD7Q7Z3H4 446 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 SLFN11Q7Z7L1 901 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 BRSK2Q8IWQ3 736 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 TRIM15Q9C019 465 aa17.34■□□□□ 0.37
TCOF1-206ENST00000445265 LYPLA2O95372 231 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.37
TCOF1-206ENST00000445265 MED21Q13503 144 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 TMEM154Q6P9G4 183 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 CATSPER1Q8NEC5 780 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 APPL2Q8NEU8 664 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 ATXN7L3BQ96GX2 97 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 PPME1Q9Y570 386 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 DPEP1P16444 411 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 PMLP29590 882 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 OAZ1P54368 228 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 PKN2Q16513 984 aaKnown RBP17.33■□□□□ 0.37
TCOF1-206ENST00000445265 UGP2Q16851 508 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 LRRC38Q5VT99 294 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 CCNJLQ8IV13 435 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 ZKSCAN4Q969J2 545 aaPredicted RBP17.33■□□□□ 0.37
TCOF1-206ENST00000445265 ELMO3Q96BJ8 720 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 CDY2AQ9Y6F7 541 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.37
TCOF1-206ENST00000445265 CHEK2O96017 543 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 KCNA3P22001 575 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 EIF4BP23588 611 aaKnown RBP17.33■□□□□ 0.36
TCOF1-206ENST00000445265 FDFT1P37268 417 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 EFHC1Q5JVL4 640 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 FAXCQ5TGI0 409 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 EMC1Q8N766 993 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 DNERQ8NFT8 737 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 MAGEB5Q9BZ81 275 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 GH1P01241 217 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 CD4P01730 458 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 ABHD2P08910 425 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 RCN1Q15293 331 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 AGAP3Q96P47 875 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 TRIM62Q9BVG3 475 aa17.33■□□□□ 0.36
TCOF1-206ENST00000445265 S100BP04271 92 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 MYL2P10916 166 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 CPA2P48052 419 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 IRX1P78414 480 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 MAPRE2Q15555 327 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 SLC35G1Q2M3R5 365 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 EXOC3L1Q86VI1 746 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 APLFQ8IW19 511 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 RYBPQ8N488 228 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 CTNNAL1Q9UBT7 734 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 POU5F1BQ06416 359 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 ZNF268Q14587 947 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 MBOAT7Q96N66 472 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 NAT9Q9BTE0 207 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 ADCY3O60266 1144 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 ALDH5A1P51649 535 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 NCKAP1LP55160 1127 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 WASHC2DQ5SRD0 308 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 SWT1Q5T5J6 900 aaKnown RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 PDZD8Q8NEN9 1154 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 GGA3Q9NZ52 723 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 ADA2Q9NZK5 511 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 DRG1Q9Y295 367 aaKnown RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 MYH2Q9UKX2 1941 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 PSMD3O43242 534 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 PLA2G6O60733 806 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 ERFP50548 548 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 MAMLD1Q13495 774 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 FASTKD1Q53R41 847 aaKnown RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 CRELD2Q6UXH1 353 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
TCOF1-206ENST00000445265 C15orf41Q9Y2V0 281 aa17.32■□□□□ 0.36
TCOF1-206ENST00000445265 C3orf70A6NLC5 250 aaPredicted RBP17.31■□□□□ 0.36
TCOF1-206ENST00000445265 GLRA3O75311 464 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 PDGFRBP09619 1106 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 CXCL9Q07325 125 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 KIF19Q2TAC6 998 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 VSIG10LQ86VR7 867 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 AGR3Q8TD06 166 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 ATP6V1E2Q96A05 226 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 TMEM176AQ96HP8 235 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 NEUROG2Q9H2A3 272 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 IKZF4Q9H2S9 585 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 PLEKHA5Q9HAU0 1116 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 OPLAHO14841 1288 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 ATICP31939 592 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 DSG3P32926 999 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 HSD17B4P51659 736 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 TCP10LQ8TDR4 215 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 PFDN1O60925 122 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 SSTR1P30872 391 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 PPATQ06203 517 aa17.31■□□□□ 0.36
TCOF1-206ENST00000445265 EFTUD2Q15029 972 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■■■ 57.6
TCOF1-206ENST00000445265 TFB1MQ8WVM0 346 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms