RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 VAMP7P51809 220 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 PNOCQ13519 176 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 SGSM1Q2NKQ1 1148 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 TTC16Q8NEE8 873 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 MSANTD3Q96H12 275 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 SPATA17Q96L03 361 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 DPEP3Q9H4B8 488 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 VRTNQ9H8Y1 702 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 TDP1Q9NUW8 608 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 EHD2Q9NZN4 543 aa21.41■■□□□ 1.02
LRCH3-208ENST00000443727 MIA3Q5JRA6 1907 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 VNN1O95497 513 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 SP9P0CG40 484 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 PIK3CAP42336 1068 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 RPS9P46781 194 aaKnown RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 RAP1GAPP47736 663 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 MLLT6P55198 1093 aaPredicted RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 CDH8P55286 799 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 ADAM9Q13443 819 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 ZACNQ401N2 412 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 CC2D1AQ6P1N0 951 aaPredicted RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 C1orf228Q6PIY5 440 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 ZC3H14Q6PJT7 736 aaKnown RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 DENND5BQ6ZUT9 1274 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 INTS8Q75QN2 995 aaKnown RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 FAM186BQ8IYM0 893 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 FMR1NBQ8N0W7 255 aaPredicted RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 B3GALNT2Q8NCR0 500 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 USP13Q92995 863 aaPredicted RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 CEP295NLQ96MC4 621 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 ELOVL4Q9GZR5 314 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 KIF9Q9HAQ2 790 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 GTSE1Q9NYZ3 720 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 HOOK1Q9UJC3 728 aaKnown RBP21.4■■□□□ 1.02
LRCH3-208ENST00000443727 CCL26Q9Y258 94 aa21.4■■□□□ 1.02
LRCH3-208ENST00000443727 F5P12259 2224 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 ATP8B3O60423 1300 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 TRAV19A0A0A6YYK7 116 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 SHISA7A6NL88 538 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 MAPK13O15264 365 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 AKAP3O75969 853 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 SMC2O95347 1197 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 CKMP06732 381 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 PSMC2P35998 433 aaKnown RBP21.39■■□□□ 1.01
LRCH3-208ENST00000443727 SOX9P48436 509 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 CSTF1Q05048 431 aaKnown RBP21.39■■□□□ 1.01
LRCH3-208ENST00000443727 NFIL3Q16649 462 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 SV2AQ7L0J3 742 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 SMYD4Q8IYR2 804 aaPredicted RBP21.39■■□□□ 1.01
LRCH3-208ENST00000443727 TAF4BQ92750 862 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 ELMO3Q96BJ8 720 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 TNIP3Q96KP6 325 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 MED10Q9BTT4 135 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 IMPG2Q9BZV3 1241 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 LMAN1LQ9HAT1 526 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 NME7Q9Y5B8 376 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 R4GN57 208 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 TICRRQ7Z2Z1 1910 aa21.39■■□□□ 1.01
LRCH3-208ENST00000443727 PRR23AA6NEV1 266 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 F8VP50 259 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 SPECC1L-ADORA2AF8WAN1 911 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 TADA3O75528 432 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 USP17L7P0C7H9 530 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 TNK2Q07912 1038 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 ITPRIPL2Q3MIP1 535 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 ASCL5Q7RTU5 278 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 RALGPS2Q86X27 583 aaPredicted RBP21.38■■□□□ 1.01
LRCH3-208ENST00000443727 C8orf48Q96LL4 319 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 B3GNT5Q9BYG0 378 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 ZNF518BQ9C0D4 1074 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 MMRN2Q9H8L6 949 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 GKN1Q9NS71 199 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 TRPM5Q9NZQ8 1165 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 FBXO4Q9UKT5 387 aa21.38■■□□□ 1.01
LRCH3-208ENST00000443727 NUP210Q8TEM1 1887 aaPredicted RBP21.37■■□□□ 1.01
LRCH3-208ENST00000443727 CLDN5O00501 218 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 HLA-DRAP01903 254 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 TRIM49P0CI25 452 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 TRIM49CP0CI26 452 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 GCLMP48507 274 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 MTAPQ13126 283 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 FZD5Q13467 585 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 ZNF268Q14587 947 aaPredicted RBP21.37■■□□□ 1.01
LRCH3-208ENST00000443727 SMARCE1Q969G3 411 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 CYP2S1Q96SQ9 504 aa21.37■■□□□ 1.01
LRCH3-208ENST00000443727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.37■■□□□ 1.01
LRCH3-208ENST00000443727 ASS1P00966 412 aaKnown RBP21.36■■□□□ 1.01
LRCH3-208ENST00000443727 TRIM21P19474 475 aaKnown RBP21.36■■□□□ 1.01
LRCH3-208ENST00000443727 CTHP32929 405 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 PDE6CP51160 858 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 USP46P62068 366 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 IFRD2Q12894 506 aaPredicted RBP21.36■■□□□ 1.01
LRCH3-208ENST00000443727 LRRC32Q14392 662 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 EDRF1Q3B7T1 1238 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 C1orf220Q5T0J3 134 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 ACOT1Q86TX2 421 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 MAML2Q8IZL2 1156 aaPredicted RBP21.36■■□□□ 1.01
LRCH3-208ENST00000443727 ZNF687Q8N1G0 1237 aa21.36■■□□□ 1.01
LRCH3-208ENST00000443727 CCDC150Q8NCX0 1101 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms