RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
HDLBP-219ENST00000442714 CDH9Q9ULB4 789 aa10.88□□□□□ -0.67
HDLBP-219ENST00000442714 SLC8A2Q9UPR5 921 aa10.88□□□□□ -0.67
HDLBP-219ENST00000442714 MIA3Q5JRA6 1907 aa10.88□□□□□ -0.67
HDLBP-219ENST00000442714 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 PTPRJQ12913 1337 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 C2orf78A6NCI8 922 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 RNF40O75150 1001 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 RPP40O75818 363 aaKnown RBP10.87□□□□□ -0.67
HDLBP-219ENST00000442714 AKAP3O75969 853 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 TCF3P15923 654 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 GNL1P36915 607 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-219ENST00000442714 MTF1Q14872 753 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 SURF1Q15526 300 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 ZNF77Q15935 545 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 E2F4Q16254 413 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-219ENST00000442714 CNNM4Q6P4Q7 775 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 VSTM1Q6UX27 236 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 EPM2AIP1Q7L775 607 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-219ENST00000442714 SYT13Q7L8C5 426 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 SCN4BQ8IWT1 228 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 PDILTQ8N807 584 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 ANKRD36BP1Q96IX9 119 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 LRRC27Q9C0I9 530 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 RNF38Q9H0F5 515 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 KIAA1586Q9HCI6 787 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 TFIP11Q9UBB9 837 aaKnown RBP10.87□□□□□ -0.67
HDLBP-219ENST00000442714 EBF1Q9UH73 591 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 SCN1AP35498 2009 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 COL4A2P08572 1712 aa10.87□□□□□ -0.67
HDLBP-219ENST00000442714 A0A0A0MRY4 1105 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TRAV19A0A0A6YYK7 116 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 ZNF840PA6NDX5 716 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TGFB1I1O43294 461 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 EPN2O95208 641 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TNNC2P02585 160 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TMEM191BP0C7N4 346 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 PFKLP17858 780 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 WARSP23381 471 aaKnown RBP10.86□□□□□ -0.67
HDLBP-219ENST00000442714 BDNFP23560 247 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 LIMK1P53667 647 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 USP46P62068 366 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 NR1H3Q13133 447 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 SF3A2Q15428 464 aaKnown RBP10.86□□□□□ -0.67
HDLBP-219ENST00000442714 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
HDLBP-219ENST00000442714 PLK5Q496M5 336 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 PPM1JQ5JR12 505 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 C4orf50Q6ZRC1 276 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TRAPPC11Q7Z392 1133 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 CPA6Q8N4T0 437 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 KIAA1958Q8N8K9 716 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 FSIP1Q8NA03 581 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 MYCBPAPQ8TBZ2 947 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 SH3RF2Q8TEC5 729 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 ZNF516Q92618 1163 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 CD101Q93033 1021 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 ATP2A3Q93084 1043 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 EXOC4Q96A65 974 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 C7orf25Q9BPX7 421 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 SYT15Q9BQS2 421 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 DUSP15Q9H1R2 295 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TNMDQ9H2S6 317 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 TRPC7Q9HCX4 862 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 RXFP3Q9NSD7 469 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 HSPBP1Q9NZL4 362 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 ARHGAP26Q9UNA1 814 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 WNT6Q9Y6F9 365 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 PATJQ8NI35 1801 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 CEP295Q9C0D2 2601 aa10.86□□□□□ -0.67
HDLBP-219ENST00000442714 KMT2BQ9UMN6 2715 aaPredicted RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 K7EQS6 105 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 SPTLC2O15270 562 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 STX6O43752 255 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 TACC1O75410 805 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 CKMP06732 381 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 CENPBP07199 599 aaPredicted RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 PTPN1P18031 435 aaKnown RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 GRIK1P39086 918 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 PPP3CCP48454 512 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 NOP14P78316 857 aaKnown RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 SLC7A9P82251 487 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 EHHADHQ08426 723 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 CCDC6Q16204 474 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 GAB4Q2WGN9 574 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 DENND5BQ6ZUT9 1274 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 STXBP4Q6ZWJ1 553 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 RDH13Q8NBN7 331 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 NOC3LQ8WTT2 800 aaKnown RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 DDX1Q92499 740 aaKnown RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 C8orf48Q96LL4 319 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 TTLL2Q9BWV7 592 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 GZF1Q9H116 711 aaPredicted RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 CUEDC2Q9H467 287 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 TRPM5Q9NZQ8 1165 aa10.85□□□□□ -0.67
HDLBP-219ENST00000442714 R3HCC1Q9Y3T6 440 aaKnown RBP10.85□□□□□ -0.67
HDLBP-219ENST00000442714 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms