RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 MTSS1LQ765P7 747 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 SPACA3Q8IXA5 215 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 SMYD4Q8IYR2 804 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 VPS52Q8N1B4 723 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 SLC39A11Q8N1S5 342 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 TOP6BLQ8N6T0 577 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 LENG9Q96B70 501 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 MBOAT7Q96N66 472 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 TAAR1Q96RJ0 339 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 EMILIN2Q9BXX0 1053 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 ZBP1Q9H171 429 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 GLT8D2Q9H1C3 349 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 ARRDC1-AS1Q9H2J1 176 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 RGS18Q9NS28 235 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 NOL7Q9UMY1 257 aaKnown RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 MTF2Q9Y483 593 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 PCDHGA5Q9Y5G8 931 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 TRPV2Q9Y5S1 764 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 NUMBLQ9Y6R0 609 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 MORC2Q9Y6X9 1032 aaPredicted RBP5.29□□□□□ -1.56
PTPN4-206ENST00000441089 WDR81Q562E7 1941 aa5.29□□□□□ -1.56
PTPN4-206ENST00000441089 KDM3AQ9Y4C1 1321 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 IGLV3-22A0A075B6J6 115 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CYP3A7-CYP3A51PA0A087WV96 503 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CCDC195A0A1B0GUA6 201 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 MBLAC1A4D2B0 266 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 C9IYK1 514 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 FAM86B1E9PN63 330 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 H0Y626 953 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 MAN2B1O00754 1011 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 GIPC1O14908 333 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 SORBS3O60504 671 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CCNT1O60563 726 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 PPP6R2O75170 966 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 EPN2O95208 641 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 TRIM16O95361 564 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CYP3A4P08684 503 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 FAM86B2P0C5J1 330 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 OR52Z1P0C646 297 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CD72P21854 359 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CYP3A7P24462 503 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 KLRC2P26717 231 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CXCL12P48061 93 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ME1P48163 572 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CLCN4P51793 760 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 UBE2HP62256 183 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 MRPS9P82933 396 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 NEDD9Q14511 834 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 PGM5Q15124 567 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 PPP4R3AQ6IN85 833 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 MOXD1Q6UVY6 613 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 METTL7BQ6UX53 244 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 TPRG1Q6ZUI0 275 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 UBE3DQ7Z6J8 389 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 LONP2Q86WA8 852 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 TEX2Q8IWB9 1127 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ABCA7Q8IZY2 2146 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 SAMD3Q8N6K7 520 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 LSM14AQ8ND56 463 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ZSCAN18Q8TBC5 510 aaPredicted RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 RSPH1Q8WYR4 309 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 HAS1Q92839 578 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 GJA10Q969M2 543 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 LRIG1Q96JA1 1093 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ASB16Q96NS5 453 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 MTMR9Q96QG7 549 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ADAM2Q99965 735 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 PDCD2LQ9BRP1 358 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 MRPL9Q9BYD2 267 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CELF4Q9BZC1 486 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CSRNP2Q9H175 543 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ATXN3LQ9H3M9 355 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 TMX1Q9H3N1 280 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 CLMPQ9H6B4 373 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 PXMP2Q9NR77 195 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 VPS45Q9NRW7 570 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 HPSEQ9Y251 543 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 SRPRBQ9Y5M8 271 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 ATG2BQ96BY7 2078 aa5.28□□□□□ -1.56
PTPN4-206ENST00000441089 PDCD11Q14690 1871 aaKnown RBP5.28□□□□□ -1.56
PTPN4-206ENST00000441089 EML5Q05BV3 1969 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 THADAQ6YHU6 1953 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 A0A087X0B3 334 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FAM237AA0A1B0GTK4 181 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 A0A1B0GVL5 298 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 A0A1W2PQ27 194 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 A0A1W2PQ64 194 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 A0A1W2PQD8 194 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 RRN3P2A6NIE6 340 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 PP2D1A8MPX8 630 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 CHURC1-FNTBB4DL54 471 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 INPPL1O15357 1258 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 MSH4O15457 936 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 NEMFO60524 1076 aa5.27□□□□□ -1.57
PTPN4-206ENST00000441089 CUTAO60888 179 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms