RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CNOT6LQ96LI5 555 aaKnown RBP18.84■□□□□ 0.61
CCDC188-201ENST00000439765 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
CCDC188-201ENST00000439765 ABCB6Q9NP58 842 aa18.84■□□□□ 0.61
CCDC188-201ENST00000439765 WNT16Q9UBV4 365 aa18.84■□□□□ 0.61
CCDC188-201ENST00000439765 NUP210Q8TEM1 1887 aaPredicted RBP18.83■□□□□ 0.61
CCDC188-201ENST00000439765 MYO16Q9Y6X6 1858 aa18.83■□□□□ 0.61
CCDC188-201ENST00000439765 NRG2O14511 850 aaPredicted RBP18.83■□□□□ 0.6
CCDC188-201ENST00000439765 NARSO43776 548 aaKnown RBP18.83■□□□□ 0.6
CCDC188-201ENST00000439765 SRFP11831 508 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 CD58P19256 250 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 CCR2P41597 374 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 HTR4Q13639 388 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 GSE1Q14687 1217 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 MAPRE1Q15691 268 aaKnown RBP18.83■□□□□ 0.6
CCDC188-201ENST00000439765 CFAP221Q4G0U5 840 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 HSP90AA4PQ58FG1 418 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 C4orf50Q6ZRC1 276 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 TRIM59Q8IWR1 403 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 NPAS3Q8IXF0 933 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 MYCBPAPQ8TBZ2 947 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 PSMG2Q969U7 264 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 ARID3AQ99856 593 aa18.83■□□□□ 0.6
CCDC188-201ENST00000439765 FAM163BP0C2L3 166 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 GJA1P17302 382 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 NPR3P17342 541 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 PTPN1P18031 435 aaKnown RBP18.82■□□□□ 0.6
CCDC188-201ENST00000439765 AOC1P19801 751 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 BDNFP23560 247 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 NDST1P52848 882 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 DDR2Q16832 855 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 PRSS36Q5K4E3 855 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 CYP4A22Q5TCH4 519 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 ACOT1Q86TX2 421 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 TMC8Q8IU68 726 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 SCN4BQ8IWT1 228 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 FUBP3Q96I24 572 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC188-201ENST00000439765 PHOX2BQ99453 314 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
CCDC188-201ENST00000439765 FBXL21Q9UKT6 434 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 CDH7Q9ULB5 785 aa18.82■□□□□ 0.6
CCDC188-201ENST00000439765 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC188-201ENST00000439765 ZFHX2Q9C0A1 2572 aaPredicted RBP18.82■□□□□ 0.6
CCDC188-201ENST00000439765 F5P12259 2224 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 CDK11BP21127 795 aaKnown RBP18.81■□□□□ 0.6
CCDC188-201ENST00000439765 EPHA5P54756 1037 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 MARSP56192 900 aaKnown RBP18.81■□□□□ 0.6
CCDC188-201ENST00000439765 TCP11X2Q5H9J9 407 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 WDR44Q5JSH3 913 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 DNAJB7Q7Z6W7 309 aaPredicted RBP18.81■□□□□ 0.6
CCDC188-201ENST00000439765 ITIH5Q86UX2 942 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 SIX5Q8N196 739 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 MAGEC2Q9UBF1 373 aaPredicted RBP18.81■□□□□ 0.6
CCDC188-201ENST00000439765 COQ4Q9Y3A0 265 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 ANAPC1Q9H1A4 1944 aa18.81■□□□□ 0.6
CCDC188-201ENST00000439765 A0A1W2PRU2 124 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 KCNJ18B7U540 433 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 CLDN5O00501 218 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 ATP1A3P13637 1013 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 EEF1GP26641 437 aaKnown RBP18.8■□□□□ 0.6
CCDC188-201ENST00000439765 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 KCNH2Q12809 1159 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 LRMPQ12912 555 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 KCNJ12Q14500 433 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 TAF12Q16514 161 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 LEMD2Q8NC56 503 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 FLCNQ8NFG4 579 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 TATDN2Q93075 761 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 MCRS1Q96EZ8 462 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 TNIP3Q96KP6 325 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 TWNKQ96RR1 684 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 LRRC3Q9BY71 257 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 ZNF518BQ9C0D4 1074 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 CYP3A43Q9HB55 503 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 AVENQ9NQS1 362 aaPredicted RBP18.8■□□□□ 0.6
CCDC188-201ENST00000439765 SLC2A4RGQ9NR83 387 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 MAGED2Q9UNF1 606 aaPredicted RBP18.8■□□□□ 0.6
CCDC188-201ENST00000439765 ASB3Q9Y575 518 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 NUMBLQ9Y6R0 609 aa18.8■□□□□ 0.6
CCDC188-201ENST00000439765 ZNF197O14709 1029 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 AFPP02771 609 aaKnown RBP18.79■□□□□ 0.6
CCDC188-201ENST00000439765 CFHP08603 1231 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 CCDC130P13994 396 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 RPL10AP62906 217 aaKnown RBP18.79■□□□□ 0.6
CCDC188-201ENST00000439765 TEAD2Q15562 447 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 SHKBP1Q8TBC3 707 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 B3GNT5Q9BYG0 378 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 USP34Q70CQ2 3546 aa18.79■□□□□ 0.6
CCDC188-201ENST00000439765 KRBA1A5PL33 1030 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 LRRC10BA6NIK2 292 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 H0Y858 1186 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 CILPO75339 1184 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 MOSPD3O75425 235 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 GABRR2P28476 465 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 GRIK1P39086 918 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 MAGEA11P43364 429 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 CACNA2D1P54289 1103 aa18.78■□□□□ 0.6
CCDC188-201ENST00000439765 ZNF394Q53GI3 561 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms