RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 AGO2Q9UKV8 859 aaKnown RBP9.46□□□□□ -0.89
COPB1-202ENST00000439561 APOBEC2Q9Y235 224 aaKnown RBP9.46□□□□□ -0.89
COPB1-202ENST00000439561 TOGARAM1Q9Y4F4 1720 aa9.46□□□□□ -0.89
COPB1-202ENST00000439561 PRR5-ARHGAP8B1AHC4 643 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ABLIM1O14639 778 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ZMPSTE24O75844 475 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ARHGAP8P85298 464 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 PDE1BQ01064 536 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 BST1Q10588 318 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 STX3Q13277 289 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 CUL2Q13617 745 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 MYBPC2Q14324 1141 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 NFIL3Q16649 462 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 SGSM1Q2NKQ1 1148 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 SWSAP1Q6NVH7 229 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ULK2Q8IYT8 1036 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ICA1LQ8NDH6 482 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 TMEM143Q96AN5 459 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 MPP4Q96JB8 637 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 PCDH9Q9HC56 1237 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ZC3H7BQ9UGR2 993 aaKnown RBP9.46□□□□□ -0.9
COPB1-202ENST00000439561 A6NJR5 290 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 MUTP22033 750 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ADSSP30520 456 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
COPB1-202ENST00000439561 GDF10P55107 478 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 PSMC1P62191 440 aaKnown RBP9.46□□□□□ -0.9
COPB1-202ENST00000439561 OCRLQ01968 901 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 DNAL1Q4LDG9 190 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 MSS51Q4VC12 460 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 GPAT2Q6NUI2 795 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 APLFQ8IW19 511 aaPredicted RBP9.46□□□□□ -0.9
COPB1-202ENST00000439561 TRIM42Q8IWZ5 723 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ABRAQ8N0Z2 381 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 FBXO27Q8NI29 283 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 GSDMBQ8TAX9 411 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 DEPDC1BQ8WUY9 529 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 ATXN7L3BQ96GX2 97 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 RIT2Q99578 217 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 VPS11Q9H270 941 aa9.46□□□□□ -0.9
COPB1-202ENST00000439561 K7ERI5 159 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 NDC80O14777 642 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 ADCY3O60266 1144 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 RAD17O75943 681 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 GYS1P13807 737 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 SAT1P21673 171 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 KLRC2P26717 231 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 RPL22P35268 128 aaKnown RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 GPX6P59796 221 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 TRMT5Q32P41 509 aaKnown RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 CNPY1Q3B7I2 92 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 KBTBD2Q8IY47 623 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 PRPF31Q8WWY3 499 aaKnown RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 GMCL1Q96IK5 515 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 APOPT1Q96IL0 206 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 GCNAQ96QF7 691 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 RMDN3Q96TC7 470 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 POLR3FQ9H1D9 316 aaPredicted RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 EBF3Q9H4W6 596 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 TAGLN3Q9UI15 199 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 RABGEF1Q9UJ41 708 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 PPM1HQ9ULR3 514 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 MYH11P35749 1972 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 TCRBV7S3A2A0A539 114 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 KCNN4O15554 427 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 TYROBPO43914 113 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 GRAP2O75791 330 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 CALB1P05937 261 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 KRT3P12035 628 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 GCAP28676 217 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 CDH6P55285 790 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 NCOA4Q13772 614 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 PPP6R3Q5H9R7 873 aaPredicted RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 RNASEH2BQ5TBB1 312 aaKnown RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 NXNQ6DKJ4 435 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 IYDQ6PHW0 289 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 TRIM72Q6ZMU5 477 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 GALNT4Q8N4A0 578 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 ZBTB45Q96K62 511 aaPredicted RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 DNAJC1Q96KC8 554 aaKnown RBP9.45□□□□□ -0.9
COPB1-202ENST00000439561 PLIN4Q96Q06 1357 aa9.45□□□□□ -0.9
COPB1-202ENST00000439561 A8MXQ7 604 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 MAGEB2O15479 319 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ZBED1O96006 694 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 PROCP04070 461 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 C6orf222P0C671 652 aaPredicted RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 UNGP13051 313 aaPredicted RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 NLRP11P59045 1033 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 NOMO3P69849 1222 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 GTF2BQ00403 316 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ROR1Q01973 937 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 PEX6Q13608 980 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 CYTH1Q15438 398 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 LIN52Q52LA3 116 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 WDR78Q5VTH9 848 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 OR52E8Q6IFG1 317 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 MTHFD1LQ6UB35 978 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 DENND5BQ6ZUT9 1274 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms