RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZC3H3Q8IXZ2 948 aaKnown RBP11.14□□□□□ -0.63
MCF2L-216ENST00000439475 CRYBG2Q8N1P7 616 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 CSGALNACT1Q8TDX6 532 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 DNASE1L2Q92874 299 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 NT5C1AQ9BXI3 368 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 PLA2G2FQ9BZM2 168 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 NIF3L1Q9GZT8 377 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 FAM124BQ9H5Z6 455 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-216ENST00000439475 SMYD3Q9H7B4 428 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 MRPS17Q9Y2R5 130 aaKnown RBP11.14□□□□□ -0.63
MCF2L-216ENST00000439475 VCANP13611 3396 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 MAN2B1O00754 1011 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CHADO15335 359 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 PDGFBP01127 241 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CCDC192P0DO97 292 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 PFKLP17858 780 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 AOC1P19801 751 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 VIPR2P41587 438 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 NDST1P52848 882 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 STARD6P59095 220 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CYP4F8P98187 520 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 GRM2Q14416 872 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 MLF2Q15773 248 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 SPOPLQ6IQ16 392 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 VITQ6UXI7 678 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CLEC17AQ6ZS10 378 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 MON1AQ86VX9 555 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CMTM8Q8IZV2 173 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 MAB21L3Q8N8X9 362 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 BPIFB1Q8TDL5 484 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 SLITRK1Q96PX8 696 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 SLC46A2Q9BY10 475 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 DPEP3Q9H4B8 488 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 KIF9Q9HAQ2 790 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 TRPV5Q9NQA5 729 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 COMMD8Q9NX08 183 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 TRPM5Q9NZQ8 1165 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 DACH1Q9UI36 760 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 CTNND2Q9UQB3 1225 aa11.13□□□□□ -0.63
MCF2L-216ENST00000439475 ZNF638Q14966 1978 aaKnown RBP11.13□□□□□ -0.63
MCF2L-216ENST00000439475 TRAV19A0A0A6YYK7 116 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 KANSL1LA0AUZ9 987 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 KRBA1A5PL33 1030 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 F8VP50 259 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 P4HA2O15460 535 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 USP17L7P0C7H9 530 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 GLULP15104 373 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 NPR3P17342 541 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 FCARP24071 287 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 ASPAP45381 313 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 PTPN5P54829 565 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 STX17P56962 302 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-216ENST00000439475 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 CC2D1AQ6P1N0 951 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-216ENST00000439475 C1orf228Q6PIY5 440 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 POTEHQ6S545 545 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 ZNF852Q6ZMS4 543 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 MLKLQ8NB16 471 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 FAM122AQ96E09 287 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 CYFIP2Q96F07 1278 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 SMARCD1Q96GM5 515 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 MSANTD3Q96H12 275 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
MCF2L-216ENST00000439475 B3GNT5Q9BYG0 378 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 BCO2Q9BYV7 579 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 OSBPL6Q9BZF3 934 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 SDCBP2Q9H190 292 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 NUP62CLQ9H1M0 184 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 TBC1D17Q9HA65 648 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-216ENST00000439475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.12□□□□□ -0.63
MCF2L-216ENST00000439475 TDP1Q9NUW8 608 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 COQ4Q9Y3A0 265 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 SIT1Q9Y3P8 196 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
MCF2L-216ENST00000439475 MYH10P35580 1976 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 CLDN5O00501 218 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 AP1G2O75843 785 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 ABL1P00519 1130 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 HDCP19113 662 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 CD58P19256 250 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 BMP6P22004 513 aa11.11□□□□□ -0.63
MCF2L-216ENST00000439475 TBXAS1P24557 533 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-216ENST00000439475 YWHAQP27348 245 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms