RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PCDHA5Q9Y5H7 936 aa9.15□□□□□ -0.94
HERPUD2-206ENST00000438224 ZFP37Q9Y6Q3 630 aaPredicted RBP9.15□□□□□ -0.94
HERPUD2-206ENST00000438224 RIF1Q5UIP0 2472 aaKnown RBP9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SHISA7A6NL88 538 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 PI15O43692 258 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 RNF40O75150 1001 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 PDGFRBP09619 1106 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 TRIM49P0CI25 452 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 TRIM49CP0CI26 452 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 HMGA1P17096 107 aaKnown RBP9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 WARSP23381 471 aaKnown RBP9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 NR2F2P24468 414 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 CYP2F1P24903 491 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 ERCC5P28715 1186 aaPredicted RBP9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 AVPR2P30518 371 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 VIPR2P41587 438 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 PRCPP42785 496 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 ALDH1A3P47895 512 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 EPHB3P54753 998 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SEC13P55735 322 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 CYP4F8P98187 520 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 TSPY1Q01534 308 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 PPP3CAQ08209 521 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 MYO1EQ12965 1108 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 NFIL3Q16649 462 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 ZACNQ401N2 412 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 CEP135Q66GS9 1140 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 IQCEQ6IPM2 695 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 FAM171BQ6P995 826 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SPATA18Q8TC71 538 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SPPL2BQ8TCT7 592 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 NXPE3Q969Y0 559 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SYT15Q9BQS2 421 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 DPEP3Q9H4B8 488 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SMYD3Q9H7B4 428 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 SLC2A4RGQ9NR83 387 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 GDE1Q9NZC3 331 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 CA14Q9ULX7 337 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 HCN4Q9Y3Q4 1203 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
HERPUD2-206ENST00000438224 TRIM49BA6NDI0 452 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ZNF197O14709 1029 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 CALUO43852 315 aaPredicted RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ECI2O75521 394 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 TADA3O75528 432 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 MICAL2O94851 1124 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 DKK1O94907 266 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 PRAMEF12O95522 483 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 STAU1O95793 577 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 BMP6P22004 513 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 GABRR2P28476 465 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 RAP1GAPP47736 663 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 LHX1P48742 406 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 CDH8P55286 799 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 MYL7Q01449 175 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 TCF15Q12870 199 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 PLD1Q13393 1074 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 BIRC3Q13489 604 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 GRM2Q14416 872 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 DDR2Q16832 855 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 PTPRNQ16849 979 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 WDR72Q3MJ13 1102 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 CYP4A22Q5TCH4 519 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ZNF658Q5TYW1 1059 aaPredicted RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ISM2Q6H9L7 571 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 SPOPLQ6IQ16 392 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 VITQ6UXI7 678 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 SCARA5Q6ZMJ2 495 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 MTSS1LQ765P7 747 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 SV2AQ7L0J3 742 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 DPH6Q7L8W6 267 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 SUGP1Q8IWZ8 645 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ZC3H3Q8IXZ2 948 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 DCP1BQ8IZD4 617 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ELMOD1Q8N336 334 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ZSCAN18Q8TBC5 510 aaPredicted RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 C2orf15Q8WU43 125 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 MYLPFQ96A32 169 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 CCDC47Q96A33 483 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 TIGD1Q96MW7 591 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 LRRC3BQ96PB8 259 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 MMS19Q96T76 1030 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 WNT16Q9UBV4 365 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 HMGXB4Q9UGU5 601 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 FBXL21Q9UKT6 434 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 ASB3Q9Y575 518 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 FAM186AA6NE01 2351 aa9.13□□□□□ -0.95
HERPUD2-206ENST00000438224 KIAA1549LQ6ZVL6 1849 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 ZFHX2Q9C0A1 2572 aaPredicted RBP9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 GOLGA6L4A6NEF3 574 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 MAPK13O15264 365 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 TACC1O75410 805 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 HLA-DRAP01903 254 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 F11P03951 625 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 BDNFP23560 247 aa9.12□□□□□ -0.95
HERPUD2-206ENST00000438224 PCSK1P29120 753 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms