RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ZNF624Q9P2J8 865 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 GUCA1AP43080 201 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 CHN2P52757 468 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 STK4Q13043 487 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 ANKRD40Q6AI12 368 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 LRRC17Q8N6Y2 441 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 RAB6BQ9NRW1 208 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 SLC24A2Q9UI40 661 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 DFFAO00273 331 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 HSMCR30P0CW71 290 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 NR1I3Q14994 352 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PFKFB3Q16875 520 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 LRRC24Q50LG9 513 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 GPD1LQ8N335 351 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 ATPAF2Q8N5M1 289 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 USP13Q92995 863 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 MOV10Q9HCE1 1003 aaKnown RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 AKAP7Q9P0M2 348 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 EXTL3O43909 919 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 TNFRSF21O75509 655 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PDE8BO95263 885 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 SLC16A1P53985 500 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 CSE1LP55060 971 aaKnown RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 MAD2L1Q13257 205 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 ARID3BQ8IVW6 561 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 STK32AQ8WU08 396 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 MRPL4Q9BYD3 311 aaKnown RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 RPL26L1Q9UNX3 145 aaKnown RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 STAT3P40763 770 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PHKA1P46020 1223 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 GCLMP48507 274 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 TUBA1BP68363 451 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 KIZQ2M2Z5 673 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 SLC25A24Q6NUK1 477 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 TUBA1AQ71U36 451 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 TEX13BQ9BXU2 312 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 APEX2Q9UBZ4 518 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 SLC29A2Q14542 456 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF284Q2VY69 593 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 CLVS1Q8IUQ0 354 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 KBTBD8Q8NFY9 601 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 RASSF5Q8WWW0 418 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 EPB41L4AQ9HCS5 686 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PDS5AQ29RF7 1337 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 POLR2EP19388 210 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 XIAPP98170 497 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PREPLQ4J6C6 727 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 AFF4Q9UHB7 1163 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PLEKHG2Q9H7P9 1386 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PPP3CCP48454 512 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 MTERF2Q49AM1 385 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 NAPEPLDQ6IQ20 393 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CASP12Q6UXS9 341 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 TMCO1Q9UM00 188 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SORCS3Q9UPU3 1222 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ACADLP28330 430 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SOAT1P35610 550 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ITGA8P53708 1063 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 Q3C1V9 767 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 MS4A14Q96JA4 679 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 TNIP3Q96KP6 325 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 NUAK2Q9H093 628 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CIDEBQ9UHD4 219 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 CARD8Q9Y2G2 431 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 H2AFXP16104 143 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ATP6V1B2P21281 511 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 NR1H2P55055 460 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 TRAP1Q12931 704 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 DNAJC3Q13217 504 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 NR1D2Q14995 579 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 DUOXA2Q1HG44 320 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 AADATQ8N5Z0 425 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SUN5Q8TC36 379 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 PIGSQ96S52 555 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 L2HGDHQ9H9P8 463 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 DDX18Q9NVP1 670 aaKnown RBP11.94□□□□□ -0.5
PTCH1-209ENST00000437951 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SAGE2PA6NJ88 616 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 MYL12BO14950 172 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ZNF185O15231 689 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 MSH3P20585 1137 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 SEC24CP53992 1094 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ITGADQ13349 1161 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ATXN7L3BQ96GX2 97 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 POLIQ9UNA4 740 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 C15orf38-AP3S2A0A0A6YYH1 394 aa11.94□□□□□ -0.5
PTCH1-209ENST00000437951 ATP9BO43861 1147 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms