RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 AP4B1Q9Y6B7 739 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 BCORQ6W2J9 1755 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 COL1A1P02452 1464 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 FAM155BO75949 473 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 TAL1P17542 331 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 ALDH1A3P47895 512 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 RELAQ04206 551 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 CD300CQ08708 224 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 FAAP100Q0VG06 881 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 GRM2Q14416 872 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SPDYAQ5MJ70 313 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 LPCAT2Q7L5N7 544 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 FASTKD5Q7L8L6 764 aaKnown RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SERAC1Q96JX3 654 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 SENP6Q9GZR1 1112 aaPredicted RBP7.79□□□□□ -1.16
CPSF6-202ENST00000435070 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
CPSF6-202ENST00000435070 FBP2O00757 339 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SLC16A3O15427 465 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 FDX1P10109 184 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 RBP3P10745 1247 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 PORP16435 677 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 MAN1A1P33908 653 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 KPNA1P52294 538 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 PHEXP78562 749 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ITGA7Q13683 1181 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 HSF5Q4G112 596 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CDHR3Q6ZTQ4 885 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 IFNLR1Q8IU57 520 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 PASD1Q8IV76 773 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 FAM178BQ8IXR5 827 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CCT7Q99832 543 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 DMTF1Q9Y222 760 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 GJA3Q9Y6H8 435 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TAS2R40P59535 323 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 FMO1Q01740 532 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SBK1Q52WX2 424 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 KCTD1Q719H9 257 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TEKT1Q969V4 418 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TRIM56Q9BRZ2 755 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CAAP1Q9H8G2 361 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF408Q9H9D4 720 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 MAD1L1Q9Y6D9 718 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 DNALI1O14645 258 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 DNAJA2O60884 412 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 GLRA2P23416 452 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CDK8P49336 464 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 PRKD1Q15139 912 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SMAD1Q15797 465 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 MSS51Q4VC12 460 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ODR4Q5SWX8 454 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 BANPQ8N9N5 519 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 DQX1Q8TE96 717 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SREK1Q8WXA9 508 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SH2D3AQ9BRG2 576 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TRNAU1APQ9NX07 287 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 GTF3C4Q9UKN8 822 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CRTAMO95727 393 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ABHD2P08910 425 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 EIF2B2P49770 351 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 MYBPC1Q00872 1141 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 LMNB2Q03252 620 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 BFSP1Q12934 665 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 HIF1AQ16665 826 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SYDE1Q6ZW31 735 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SLCO2A1Q92959 643 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF512Q96ME7 567 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 AGPAT3Q9NRZ7 376 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CLUHO75153 1309 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TMX2-CTNND1H3BSU7 103 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TOM1L1O75674 476 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 LDHAP00338 332 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CDH2P19022 906 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SLC5A3P53794 718 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 PTK7Q13308 1070 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 OGFOD2Q6N063 350 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TXNRD3Q86VQ6 643 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 RAVER1Q8IY67 606 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 CYP2W1Q8TAV3 490 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 RABGEF1Q9UJ41 708 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 USP17L10C9JJH3 530 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 COPEO14579 308 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 P4HA2O15460 535 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 NRLP54845 237 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 HADHBP55084 474 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 TPD52P55327 224 aaPredicted RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 YWHAGP61981 247 aaKnown RBP eCLIP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 PSMD6Q15008 389 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF410Q86VK4 478 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ATP11CQ8NB49 1132 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 FBXO36Q8NEA4 188 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 ERMNQ8TAM6 284 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 WWP1Q9H0M0 922 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 GPAMQ9HCL2 828 aa7.78□□□□□ -1.16
CPSF6-202ENST00000435070 HBS1LQ9Y450 684 aaKnown RBP7.78□□□□□ -1.16
CPSF6-202ENST00000435070 SCN11AQ9UI33 1791 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 DENND3A2RUS2 1198 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 PPP1R11O60927 126 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms