RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 RBP5P82980 135 aa14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 PLK5Q496M5 336 aa14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 SYT13Q7L8C5 426 aa14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 ARL14EPQ8N8R7 260 aaPredicted RBP14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 SH3RF2Q8TEC5 729 aa14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 ZC3H10Q96K80 434 aaKnown RBP14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 MTMR12Q9C0I1 747 aa14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 FBRSL1Q9HCM7 1045 aaKnown RBP14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 RXFP3Q9NSD7 469 aa14.36□□□□□ -0.11
CDC42EP1-204ENST00000434728 DCLK1O15075 740 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 CAVIN2O95810 425 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 TNNC2P02585 160 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 HDCP19113 662 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 GARTP22102 1010 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 STAT6P42226 847 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 SEC13P55735 322 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 KCNA1Q09470 495 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 USP4Q13107 963 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 ALCAMQ13740 583 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 MAPRE1Q15691 268 aaKnown RBP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 ZNF77Q15935 545 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 CFAP221Q4G0U5 840 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 USP39Q53GS9 565 aaKnown RBP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 DAB2IPQ5VWQ8 1189 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 NAIF1Q69YI7 327 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 TCEAL6Q6IPX3 200 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 PSAPL1Q6NUJ1 521 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 STXBP4Q6ZWJ1 553 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 C11orf74Q86VG3 221 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 TOP6BLQ8N6T0 577 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 RIN3Q8TB24 985 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 SPATA18Q8TC71 538 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 TCEAL3Q969E4 200 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 FUBP3Q96I24 572 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 DUSP15Q9H1R2 295 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 PCIF1Q9H4Z3 704 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 PDE11AQ9HCR9 933 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 MAGEC2Q9UBF1 373 aaPredicted RBP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 CHD6Q8TD26 2715 aa14.35□□□□□ -0.11
CDC42EP1-204ENST00000434728 C2orf78A6NCI8 922 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 MYMKA6NI61 221 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 TADA3O75528 432 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 CLSTN1O94985 981 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 KCNK5O95279 499 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 ABL1P00519 1130 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 PDCP20941 246 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 GRIK1P39086 918 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 NOVA1P51513 510 aaKnown RBP14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 EML3Q32P44 896 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 C2orf27AQ580R0 203 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 PLA2G2CQ5R387 149 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 ANO7Q6IWH7 933 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 USP49Q70CQ1 688 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 MYRFLQ96LU7 910 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 SLC22A12Q96S37 553 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 TPSD1Q9BZJ3 242 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 GDAP2Q9NXN4 497 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 EHD2Q9NZN4 543 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 TRPM5Q9NZQ8 1165 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 INVSQ9Y283 1065 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 CACNA1GO43497 2377 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 THADAQ6YHU6 1953 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 NUP205Q92621 2012 aa14.34□□□□□ -0.11
CDC42EP1-204ENST00000434728 MYO16Q9Y6X6 1858 aa14.33□□□□□ -0.11
CDC42EP1-204ENST00000434728 ANAPC1Q9H1A4 1944 aa14.33□□□□□ -0.11
CDC42EP1-204ENST00000434728 PPP1R37O75864 691 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 CD2BP2O95400 341 aaKnown RBP14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 PTMSP20962 102 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 PMLP29590 882 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 WNT7BP56706 349 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 PSMC1P62191 440 aaKnown RBP14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 CCDC142Q17RM4 750 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 LMBRD2Q68DH5 695 aaPredicted RBP14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 CYP2U1Q7Z449 544 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 GPD1LQ8N335 351 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 HPDLQ96IR7 371 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 CBWD1Q9BRT8 395 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 OLFML3Q9NRN5 406 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 PANK4Q9NVE7 773 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 EBF1Q9UH73 591 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 CDH9Q9ULB4 789 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 CLIC4Q9Y696 253 aa14.33□□□□□ -0.12
CDC42EP1-204ENST00000434728 ABCA7Q8IZY2 2146 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 KIAA1549LQ6ZVL6 1849 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 CFAP47Q6ZTR5 3102 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 BCLAF3A2AJT9 711 aaKnown RBP14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 C4orf47A7E2U8 309 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 KHNYNO15037 678 aaKnown RBP14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 HCRTO43612 131 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 ALDH1A2O94788 518 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 PRPF6O94906 941 aaKnown RBP14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 HSP90AA1P07900 732 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms