RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 ATF6P18850 670 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 RFX1P22670 979 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 GPR15P49685 360 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 CBX2Q14781 532 aaPredicted RBP22.74■■□□□ 1.23
TOP3B-205ENST00000434517 TAF12Q16514 161 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 DDR2Q16832 855 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 GRASPQ7Z6J2 395 aaPredicted RBP22.74■■□□□ 1.23
TOP3B-205ENST00000434517 ITIH5Q86UX2 942 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 FUKQ8N0W3 1084 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 NEK11Q8NG66 645 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 GIPC2Q8TF65 315 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 SUSD6Q92537 303 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 SMARCD1Q96GM5 515 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 NAP1L5Q96NT1 182 aaPredicted RBP22.74■■□□□ 1.23
TOP3B-205ENST00000434517 ERGIC2Q96RQ1 377 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 CORO1BQ9BR76 489 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 CEP72Q9P209 647 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 AJAP1Q9UKB5 411 aaPredicted RBP22.74■■□□□ 1.23
TOP3B-205ENST00000434517 SIK3Q9Y2K2 1263 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 FHOD1Q9Y613 1164 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 XIRP2A4UGR9 3374 aa22.74■■□□□ 1.23
TOP3B-205ENST00000434517 PAEPP09466 180 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 UCHL3P15374 230 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 PTPN2P17706 415 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 UBASH3AP57075 661 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 SDHAF4Q5VUM1 108 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 DPY19L2P1Q6NXN4 242 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 GPR152Q8TDT2 470 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 HNRNPABQ99729 332 aaKnown RBP22.73■■□□□ 1.23
TOP3B-205ENST00000434517 KRT82Q9NSB4 513 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 HCFC1R1Q9NWW0 138 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 ASB3Q9Y575 518 aa22.73■■□□□ 1.23
TOP3B-205ENST00000434517 RNF225M0QZC1 329 aaPredicted RBP22.72■■□□□ 1.23
TOP3B-205ENST00000434517 AP1G2O75843 785 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 FAM200BP0CF97 657 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 VDRP11473 427 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 IL9P15248 144 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 SMAD2Q15796 467 aaKnown RBP22.72■■□□□ 1.23
TOP3B-205ENST00000434517 PABPC1LQ4VXU2 614 aaKnown RBP22.72■■□□□ 1.23
TOP3B-205ENST00000434517 SGO2Q562F6 1265 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 PPP1R26Q5T8A7 1209 aaPredicted RBP22.72■■□□□ 1.23
TOP3B-205ENST00000434517 PAQR9Q6ZVX9 377 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 SHC3Q92529 594 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 PSMG2Q969U7 264 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 GANQ9H2C0 597 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 POMKQ9H5K3 350 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 ASAH2Q9NR71 780 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 DNMT3BQ9UBC3 853 aaKnown RBP22.72■■□□□ 1.23
TOP3B-205ENST00000434517 KIAA1257Q9ULG3 409 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 DOCK6Q96HP0 2047 aa22.72■■□□□ 1.23
TOP3B-205ENST00000434517 DENND4AQ7Z401 1863 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 F8VP50 259 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 BMP1P13497 986 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 POLR2FP61218 127 aaKnown RBP22.71■■□□□ 1.23
TOP3B-205ENST00000434517 NTHL1P78549 312 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 PTPN21Q16825 1174 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 WDR6Q9NNW5 1121 aaKnown RBP22.71■■□□□ 1.23
TOP3B-205ENST00000434517 DMAP1Q9NPF5 467 aaPredicted RBP22.71■■□□□ 1.23
TOP3B-205ENST00000434517 IFNKQ9P0W0 207 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 CNTN6Q9UQ52 1028 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 CLUHO75153 1309 aa22.71■■□□□ 1.23
TOP3B-205ENST00000434517 RHOP08100 348 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 CSH1P0DML2 217 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 CSH2P0DML3 217 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 ZNF132P52740 706 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 CACNA2D1P54289 1103 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 DRAP1Q14919 205 aaPredicted RBP22.7■■□□□ 1.22
TOP3B-205ENST00000434517 NR1I3Q14994 352 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 CYP4A22Q5TCH4 519 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 ARHGAP17Q68EM7 881 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 PDZD4Q76G19 769 aaPredicted RBP22.7■■□□□ 1.22
TOP3B-205ENST00000434517 DNAJB7Q7Z6W7 309 aaPredicted RBP22.7■■□□□ 1.22
TOP3B-205ENST00000434517 HS6ST3Q8IZP7 471 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 STKLD1Q8NE28 680 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 C8orf48Q96LL4 319 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 NAA15Q9BXJ9 866 aaKnown RBP22.7■■□□□ 1.22
TOP3B-205ENST00000434517 NLRC4Q9NPP4 1024 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 MAGED2Q9UNF1 606 aaPredicted RBP22.7■■□□□ 1.22
TOP3B-205ENST00000434517 DAAM1Q9Y4D1 1078 aa22.7■■□□□ 1.22
TOP3B-205ENST00000434517 SLC38A8A6NNN8 435 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 NOL4O94818 638 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 CALCAP01258 141 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 TPM3P06753 285 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 MYL4P12829 197 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 FSHRP23945 695 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 MAP3K7CLP57077 242 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 GOLGA7BQ2TAP0 167 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 GET4Q7L5D6 327 aaPredicted RBP22.69■■□□□ 1.22
TOP3B-205ENST00000434517 LEMD2Q8NC56 503 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 SPATA17Q96L03 361 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 SPAG5Q96R06 1193 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 KCNK16Q96T55 309 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 LRFN3Q9BTN0 628 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 STK33Q9BYT3 514 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 TMEM30AQ9NV96 361 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 HESX1Q9UBX0 185 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 TSPAN16Q9UKR8 245 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 TCF20Q9UGU0 1960 aaKnown RBP22.69■■□□□ 1.22
TOP3B-205ENST00000434517 GREB1Q4ZG55 1949 aa22.69■■□□□ 1.22
TOP3B-205ENST00000434517 A0A1W2PQC6 194 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms