RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 USP2O75604 605 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 FSBPO95073 299 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ABHD2P08910 425 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 WEE2P0C1S8 567 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 KRT5P13647 590 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 UBA1P22314 1058 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 PROZP22891 400 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 EIF4BP23588 611 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 IVDP26440 423 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 MAP2K2P36507 400 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 FLT3P36888 993 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 CCT5P48643 541 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 MARCKSL1P49006 195 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 STAT5BP51692 787 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 NLRP11P59045 1033 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 IFFO1Q0D2I5 559 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 NCOA4Q13772 614 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 PIGHQ14442 188 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ACAP1Q15027 740 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 RASA2Q15283 850 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 FAM187BQ17R55 369 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 SGSM1Q2NKQ1 1148 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 SGO2Q562F6 1265 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ERMARDQ5T6L9 678 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 KCTD16Q68DU8 428 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 TTC27Q6P3X3 843 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 C6orf89Q6UWU4 347 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 TAOK1Q7L7X3 1001 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 POLNQ7Z5Q5 900 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 PRRT2Q7Z6L0 340 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 TADA2BQ86TJ2 420 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 NLRP14Q86W24 1093 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ZBTB8OSQ8IWT0 167 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 CCDC105Q8IYK2 499 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 RCOR2Q8IZ40 523 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 TTC39CQ8N584 583 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 SHCBP1Q8NEM2 672 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 FEZF2Q8TBJ5 459 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ASAP3Q8TDY4 903 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 IPO4Q8TEX9 1081 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 FNIP1Q8TF40 1166 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ZNF473Q8WTR7 871 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 GLG1Q92896 1179 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 SNF8Q96H20 258 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 PCYT2Q99447 389 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 MSTO1Q9BUK6 570 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 DCLK3Q9C098 648 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 NIF3L1Q9GZT8 377 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 SPATC1LQ9H0A9 340 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 LHX5Q9H2C1 402 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 VRTNQ9H8Y1 702 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 PARVAQ9NVD7 372 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 DDX56Q9NY93 547 aaKnown RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 GGA3Q9NZ52 723 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 STRIP2Q9ULQ0 834 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ATP8A1Q9Y2Q0 1164 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 STARD13Q9Y3M8 1113 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 NEU2Q9Y3R4 380 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 ACTL7BQ9Y614 415 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 FAM169AQ9Y6X4 670 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 UNC80Q8N2C7 3258 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 LRRIQ4A6NIV6 560 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 C9orf172C9J069 976 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 ABLIM1O14639 778 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 CLDN3O15551 220 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 KIAA0754O94854 1291 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 IL18RAPO95256 599 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 RRM1P23921 792 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 GNA15P30679 374 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 PLTPP55058 493 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 SP2Q02086 613 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 KRT17Q04695 432 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 MAMLD1Q13495 774 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 CAPSQ13938 189 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 TFDP1Q14186 410 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 GRIK4Q16099 956 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 MAPK6Q16659 721 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 LRRC69Q6ZNQ3 347 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 TSHZ1Q6ZSZ6 1077 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 NT5DC4Q86YG4 428 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 RBBP8NLQ8NC74 664 aaPredicted RBP7.86□□□□□ -1.15
COL17A1-204ENST00000433822 TMEM35BQ8NCS4 154 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 TRPM4Q8TD43 1214 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 CCT8L2Q96SF2 557 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 ACO2Q99798 780 aaKnown RBP7.86□□□□□ -1.15
COL17A1-204ENST00000433822 HINFPQ9BQA5 517 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 SH2D3AQ9BRG2 576 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 TARS2Q9BW92 718 aaKnown RBP7.86□□□□□ -1.15
COL17A1-204ENST00000433822 HAPLN2Q9GZV7 340 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 AZI2Q9H6S1 392 aa7.86□□□□□ -1.15
COL17A1-204ENST00000433822 ACTR5Q9H9F9 607 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms