RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
TREX1-201ENST00000433541 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
TREX1-201ENST00000433541 FAM81BQ96LP2 452 aa16.48■□□□□ 0.23
TREX1-201ENST00000433541 FUCA2Q9BTY2 467 aa16.48■□□□□ 0.23
TREX1-201ENST00000433541 FAM124BQ9H5Z6 455 aaPredicted RBP16.48■□□□□ 0.23
TREX1-201ENST00000433541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.23
TREX1-201ENST00000433541 APEX2Q9UBZ4 518 aa16.48■□□□□ 0.23
TREX1-201ENST00000433541 MYO10Q9HD67 2058 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 DENND4CQ5VZ89 1909 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 A0A1W2PRU2 124 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 SLC38A8A6NNN8 435 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 FGF19O95750 216 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 CAVIN2O95810 425 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 GJA1P17302 382 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 GABRR2P28476 465 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
TREX1-201ENST00000433541 GCNT1Q02742 428 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 RAPGEF1Q13905 1077 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 ARHGAP15Q53QZ3 475 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 PHLDB3Q6NSJ2 640 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 GJB7Q6PEY0 223 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 LUZP1Q86V48 1076 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
TREX1-201ENST00000433541 ITFG1Q8TB96 612 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
TREX1-201ENST00000433541 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 CBX8Q9HC52 389 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 DMAP1Q9NPF5 467 aaPredicted RBP16.47■□□□□ 0.23
TREX1-201ENST00000433541 UXTQ9UBK9 157 aaPredicted RBP16.47■□□□□ 0.23
TREX1-201ENST00000433541 USTQ9Y2C2 406 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 OBSL1O75147 1896 aa16.47■□□□□ 0.23
TREX1-201ENST00000433541 SPTBN5Q9NRC6 3674 aaKnown RBP16.47■□□□□ 0.23
TREX1-201ENST00000433541 SERPINC1P01008 464 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 CEBPBP17676 345 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 PON1P27169 355 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 CDC25CP30307 473 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 RAD23BP54727 409 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 MAP3K7CLP57077 242 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 SLC8A3P57103 927 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 APBA1Q02410 837 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 UBXN1Q04323 297 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 MTMR3Q13615 1198 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 NCAPHQ15003 741 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 SGO2Q562F6 1265 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 PPP1R26Q5T8A7 1209 aaPredicted RBP16.46■□□□□ 0.23
TREX1-201ENST00000433541 ENOSF1Q7L5Y1 443 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 RBBP8NLQ8NC74 664 aaPredicted RBP16.46■□□□□ 0.23
TREX1-201ENST00000433541 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 FGF13Q92913 245 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 TCEAL4Q96EI5 215 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 MCRS1Q96EZ8 462 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 MYADMQ96S97 322 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 ZNF334Q9HCZ1 680 aaPredicted RBP16.46■□□□□ 0.23
TREX1-201ENST00000433541 EHD2Q9NZN4 543 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 HESX1Q9UBX0 185 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 LIMA1Q9UHB6 759 aaKnown RBP16.46■□□□□ 0.23
TREX1-201ENST00000433541 CDH7Q9ULB5 785 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 A0A0C4DFX4 3053 aa16.46■□□□□ 0.23
TREX1-201ENST00000433541 PATJQ8NI35 1801 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 NCOR1O75376 2440 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 LOC730098B7Z3J9 87 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 PAPLNO95428 1278 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 ATP1A3P13637 1013 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 DENND5BQ6ZUT9 1274 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 LIMD1Q9UGP4 676 aa16.45■□□□□ 0.22
TREX1-201ENST00000433541 LGALS16A8MUM7 142 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 ABL1P00519 1130 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 ZNF18P17022 549 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 CCR2P41597 374 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 CYP4F8P98187 520 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 TEAD2Q15562 447 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 GOLGA7BQ2TAP0 167 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 NPAS3Q8IXF0 933 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 ST13P5Q8NFI4 369 aaPredicted RBP16.44■□□□□ 0.22
TREX1-201ENST00000433541 MRPS31Q92665 395 aaKnown RBP16.44■□□□□ 0.22
TREX1-201ENST00000433541 SPATA17Q96L03 361 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 C8orf48Q96LL4 319 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 KREMEN1Q96MU8 473 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 KCNK16Q96T55 309 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 HNRNPABQ99729 332 aaKnown RBP16.44■□□□□ 0.22
TREX1-201ENST00000433541 COL25A1Q9BXS0 654 aaPredicted RBP16.44■□□□□ 0.22
TREX1-201ENST00000433541 DNAJC12Q9UKB3 198 aa16.44■□□□□ 0.22
TREX1-201ENST00000433541 ZFP37Q9Y6Q3 630 aaPredicted RBP16.44■□□□□ 0.22
TREX1-201ENST00000433541 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
TREX1-201ENST00000433541 PAEPP09466 180 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 VDRP11473 427 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 LAMP2P13473 410 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 NPR3P17342 541 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 IQCB1Q15051 598 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 PRSS36Q5K4E3 855 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 GPR158Q5T848 1215 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
TREX1-201ENST00000433541 PAQR9Q6ZVX9 377 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms