RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 NPTXRO95502 500 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 FNTAP49354 379 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 IL5RAQ01344 420 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 C10orf120Q5SQS8 335 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 PRUNE1Q86TP1 453 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 CASP10Q92851 521 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 KLHL4Q9C0H6 718 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 SMARCAD1Q9H4L7 1026 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 GPRC5DQ9NZD1 345 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 UVRAGQ9P2Y5 699 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 SNX8Q9Y5X2 465 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 C1orf232A0A0U1RR37 186 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
SEC16A-206ENST00000431893 FAM20BO75063 409 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 EPHA7Q15375 998 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
SEC16A-206ENST00000431893 GLRA4Q5JXX5 417 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 LRRC8DQ7L1W4 858 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 B3GALNT2Q8NCR0 500 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 MED15Q96RN5 788 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 CRLS1Q9UJA2 301 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 N6AMT1Q9Y5N5 214 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 VWA5AO00534 786 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 APOA4P06727 396 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 ARMCX4Q5H9R4 360 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 NACC2Q96BF6 587 aa11.85□□□□□ -0.51
SEC16A-206ENST00000431893 FGFR3P22607 806 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 RBP5P82980 135 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 CSTF3Q12996 717 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 KCNB1Q14721 858 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 EMC2Q15006 297 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 NEDD8Q15843 81 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 USP39Q53GS9 565 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 DDX50Q9BQ39 737 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 KRT16P08779 473 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 ITGB6P18564 788 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 OR1G1P47890 313 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 CASP4P49662 377 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 PDPK2PQ6A1A2 396 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 KLHL17Q6TDP4 642 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 RTKN2Q8IZC4 609 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 KRT78Q8N1N4 520 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 CINPQ9BW66 212 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 MPP6Q9NZW5 540 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 NUP62P37198 522 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 UGP2Q16851 508 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 TDRD5Q8NAT2 981 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 PHF20Q9BVI0 1012 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 KLHL1Q9NR64 748 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 NAGPAQ9UK23 515 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 SH3BP1Q9Y3L3 701 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 TRPC5OSA6NMA1 111 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 ATP6V1G2O95670 118 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 TRPC4APQ8TEL6 797 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 VTA1Q9NP79 307 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 SYBUQ9NX95 663 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 PDP2Q9P2J9 529 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 EIF3LQ9Y262 564 aaKnown RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 METP08581 1390 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 PEX1O43933 1283 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 ITGB3P05106 788 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 FYNP06241 537 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 BMPR2Q13873 1038 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-206ENST00000431893 SEMA6AQ9H2E6 1030 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 UBP1Q9NZI7 540 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 ADGBQ8N7X0 1667 aa11.84□□□□□ -0.51
SEC16A-206ENST00000431893 RBP3P10745 1247 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 ACADSP16219 412 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 RGS4P49798 205 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 USP11P51784 963 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 BNC2Q6ZN30 1099 aaPredicted RBP11.83□□□□□ -0.51
SEC16A-206ENST00000431893 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.51
SEC16A-206ENST00000431893 FEZF2Q8TBJ5 459 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 FIG4Q92562 907 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 KCTD14Q9BQ13 255 aaPredicted RBP11.83□□□□□ -0.51
SEC16A-206ENST00000431893 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 CEP41Q9BYV8 373 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 ILKAPQ9H0C8 392 aaPredicted RBP11.83□□□□□ -0.51
SEC16A-206ENST00000431893 KLHL31Q9H511 634 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 PTCH1Q13635 1447 aa11.83□□□□□ -0.51
SEC16A-206ENST00000431893 BAIAP3O94812 1187 aa11.83□□□□□ -0.52
SEC16A-206ENST00000431893 GPC1P35052 558 aa11.83□□□□□ -0.52
SEC16A-206ENST00000431893 SGSM1Q2NKQ1 1148 aa11.83□□□□□ -0.52
SEC16A-206ENST00000431893 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
SEC16A-206ENST00000431893 SYTL1Q8IYJ3 562 aa11.83□□□□□ -0.52
SEC16A-206ENST00000431893 UTP15Q8TED0 518 aaKnown RBP11.83□□□□□ -0.52
SEC16A-206ENST00000431893 NARS2Q96I59 477 aaKnown RBP11.83□□□□□ -0.52
SEC16A-206ENST00000431893 TPD52L3Q96J77 140 aa11.83□□□□□ -0.52
SEC16A-206ENST00000431893 VCPKMTQ9H867 229 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms